Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp4P35123 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.73□□□□□ -0.53
Usp4P35123 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp4P35123 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp4P35123 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Usp4P35123 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.73□□□□□ -0.53
Usp4P35123 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC11.73□□□□□ -0.53
Usp4P35123 Gm45770-201ENSMUST00000212105 616 ntBASIC11.73□□□□□ -0.53
Usp4P35123 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Usp4P35123 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.73□□□□□ -0.53
Usp4P35123 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp4P35123 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp4P35123 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp4P35123 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.73□□□□□ -0.53
Usp4P35123 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Usp4P35123 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Usp4P35123 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Usp4P35123 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp4P35123 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Usp4P35123 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp4P35123 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp4P35123 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Usp4P35123 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Usp4P35123 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Usp4P35123 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp4P35123 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp4P35123 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp4P35123 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Usp4P35123 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Usp4P35123 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Usp4P35123 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Usp4P35123 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Usp4P35123 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.72□□□□□ -0.53
Usp4P35123 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Usp4P35123 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.72□□□□□ -0.53
Usp4P35123 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
Usp4P35123 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.72□□□□□ -0.53
Usp4P35123 Gm14665-201ENSMUST00000122294 557 ntBASIC11.72□□□□□ -0.53
Usp4P35123 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.72□□□□□ -0.53
Usp4P35123 Mir7032-201ENSMUST00000185154 79 ntBASIC11.72□□□□□ -0.53
Usp4P35123 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.72□□□□□ -0.53
Usp4P35123 Gm43184-201ENSMUST00000197247 542 ntBASIC11.72□□□□□ -0.53
Usp4P35123 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.72□□□□□ -0.53
Usp4P35123 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Gm5369-201ENSMUST00000217499 588 ntBASIC11.72□□□□□ -0.53
Usp4P35123 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.72□□□□□ -0.53
Usp4P35123 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.72□□□□□ -0.53
Usp4P35123 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.72□□□□□ -0.53
Usp4P35123 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.72□□□□□ -0.53
Usp4P35123 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Usp4P35123 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp4P35123 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Usp4P35123 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Usp4P35123 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Usp4P35123 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Usp4P35123 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp4P35123 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp4P35123 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Usp4P35123 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.71□□□□□ -0.53
Usp4P35123 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.71□□□□□ -0.53
Usp4P35123 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp4P35123 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp4P35123 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp4P35123 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.71□□□□□ -0.53
Usp4P35123 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp4P35123 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp4P35123 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Usp4P35123 Gm15515-201ENSMUST00000117827 822 ntBASIC11.71□□□□□ -0.53
Usp4P35123 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms