Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Hoxc5P32043 Gm24844-201ENSMUST00000158679 127 ntBASIC10.36□□□□□ -0.75
Hoxc5P32043 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.36□□□□□ -0.75
Hoxc5P32043 Gm18367-201ENSMUST00000176139 600 ntBASIC10.36□□□□□ -0.75
Hoxc5P32043 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Hoxc5P32043 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Mir6927-201ENSMUST00000184494 71 ntBASIC10.36□□□□□ -0.75
Hoxc5P32043 Gm9540-201ENSMUST00000188230 478 ntBASIC10.36□□□□□ -0.75
Hoxc5P32043 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Gm8342-201ENSMUST00000209839 757 ntBASIC10.36□□□□□ -0.75
Hoxc5P32043 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.36□□□□□ -0.75
Hoxc5P32043 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.36□□□□□ -0.75
Hoxc5P32043 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.36□□□□□ -0.75
Hoxc5P32043 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.36□□□□□ -0.75
Hoxc5P32043 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.36□□□□□ -0.75
Hoxc5P32043 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.36□□□□□ -0.75
Hoxc5P32043 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.36□□□□□ -0.75
Hoxc5P32043 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Hoxc5P32043 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Hoxc5P32043 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Hoxc5P32043 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Hoxc5P32043 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.36□□□□□ -0.75
Hoxc5P32043 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.35□□□□□ -0.75
Hoxc5P32043 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Hoxc5P32043 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.35□□□□□ -0.75
Hoxc5P32043 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Hoxc5P32043 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.35□□□□□ -0.75
Hoxc5P32043 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.35□□□□□ -0.75
Hoxc5P32043 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.35□□□□□ -0.75
Hoxc5P32043 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.35□□□□□ -0.75
Hoxc5P32043 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hoxc5P32043 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.35□□□□□ -0.75
Hoxc5P32043 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.35□□□□□ -0.75
Hoxc5P32043 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.35□□□□□ -0.75
Hoxc5P32043 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.35□□□□□ -0.75
Hoxc5P32043 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Gm9257-201ENSMUST00000221254 232 ntBASIC10.35□□□□□ -0.75
Hoxc5P32043 Gm1821-202ENSMUST00000227415 750 ntBASIC10.35□□□□□ -0.75
Hoxc5P32043 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Hoxc5P32043 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Hoxc5P32043 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.35□□□□□ -0.75
Hoxc5P32043 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.35□□□□□ -0.75
Hoxc5P32043 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.35□□□□□ -0.75
Hoxc5P32043 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxc5P32043 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxc5P32043 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxc5P32043 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxc5P32043 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxc5P32043 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxc5P32043 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxc5P32043 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.34□□□□□ -0.75
Hoxc5P32043 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxc5P32043 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxc5P32043 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxc5P32043 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxc5P32043 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms