Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.82□□□□□ -0.36
Vcam1P29533 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vcam1P29533 Gm12912-201ENSMUST00000121596 1381 ntBASIC12.81□□□□□ -0.36
Vcam1P29533 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vcam1P29533 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.81□□□□□ -0.36
Vcam1P29533 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Vcam1P29533 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vcam1P29533 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vcam1P29533 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vcam1P29533 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.81□□□□□ -0.36
Vcam1P29533 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vcam1P29533 Gm22594-201ENSMUST00000104251 130 ntBASIC12.81□□□□□ -0.36
Vcam1P29533 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Gm1826-201ENSMUST00000118646 1162 ntBASIC12.81□□□□□ -0.36
Vcam1P29533 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Vcam1P29533 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC12.81□□□□□ -0.36
Vcam1P29533 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC12.81□□□□□ -0.36
Vcam1P29533 Gm27956-201ENSMUST00000175604 260 ntBASIC12.81□□□□□ -0.36
Vcam1P29533 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Gm2448-201ENSMUST00000207080 559 ntBASIC12.81□□□□□ -0.36
Vcam1P29533 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.81□□□□□ -0.36
Vcam1P29533 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC12.81□□□□□ -0.36
Vcam1P29533 BX649293.1-201ENSMUST00000227437 631 ntBASIC12.81□□□□□ -0.36
Vcam1P29533 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.81□□□□□ -0.36
Vcam1P29533 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Gm7405-201ENSMUST00000121476 1337 ntBASIC12.81□□□□□ -0.36
Vcam1P29533 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC12.81□□□□□ -0.36
Vcam1P29533 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vcam1P29533 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcam1P29533 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.81□□□□□ -0.36
Vcam1P29533 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vcam1P29533 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcam1P29533 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.8□□□□□ -0.36
Vcam1P29533 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcam1P29533 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vcam1P29533 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Vcam1P29533 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vcam1P29533 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcam1P29533 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vcam1P29533 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vcam1P29533 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC12.8□□□□□ -0.36
Vcam1P29533 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vcam1P29533 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC12.8□□□□□ -0.36
Vcam1P29533 Gm12906-201ENSMUST00000154610 441 ntBASIC12.8□□□□□ -0.36
Vcam1P29533 Gm28032-201ENSMUST00000184104 96 ntBASIC12.8□□□□□ -0.36
Vcam1P29533 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC12.8□□□□□ -0.36
Vcam1P29533 Gm43564-201ENSMUST00000196185 211 ntBASIC12.8□□□□□ -0.36
Vcam1P29533 Gm40414-201ENSMUST00000197608 481 ntBASIC12.8□□□□□ -0.36
Vcam1P29533 Gm43460-201ENSMUST00000202491 1057 ntBASIC12.8□□□□□ -0.36
Vcam1P29533 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.8□□□□□ -0.36
Vcam1P29533 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Vcam1P29533 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC12.8□□□□□ -0.36
Vcam1P29533 AC158986.2-201ENSMUST00000227487 618 ntBASIC12.8□□□□□ -0.36
Vcam1P29533 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.8□□□□□ -0.36
Vcam1P29533 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.8□□□□□ -0.36
Vcam1P29533 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Vcam1P29533 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcam1P29533 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Vcam1P29533 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.8□□□□□ -0.36
Vcam1P29533 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcam1P29533 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vcam1P29533 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.8□□□□□ -0.36
Vcam1P29533 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vcam1P29533 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vcam1P29533 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vcam1P29533 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vcam1P29533 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vcam1P29533 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcam1P29533 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcam1P29533 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcam1P29533 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Vcam1P29533 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcam1P29533 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Vcam1P29533 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcam1P29533 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcam1P29533 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.79□□□□□ -0.36
Vcam1P29533 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms