Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
P20040 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
P20040 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
P20040 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
P20040 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.94□□□□□ -0.82
P20040 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Gm13910-201ENSMUST00000121752 1428 ntBASIC9.94□□□□□ -0.82
P20040 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.94□□□□□ -0.82
P20040 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Gm13408-201ENSMUST00000119822 798 ntBASIC9.94□□□□□ -0.82
P20040 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC9.94□□□□□ -0.82
P20040 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Gm13935-201ENSMUST00000121859 798 ntBASIC9.94□□□□□ -0.82
P20040 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
P20040 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
P20040 Gm8546-201ENSMUST00000178288 1264 ntBASIC9.94□□□□□ -0.82
P20040 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.94□□□□□ -0.82
P20040 Gm10774-201ENSMUST00000188689 204 ntBASIC9.94□□□□□ -0.82
P20040 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.94□□□□□ -0.82
P20040 Gm44100-201ENSMUST00000204329 436 ntBASIC9.94□□□□□ -0.82
P20040 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.94□□□□□ -0.82
P20040 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Gm8959-201ENSMUST00000213150 571 ntBASIC9.94□□□□□ -0.82
P20040 AC159819.2-201ENSMUST00000216151 342 ntBASIC9.94□□□□□ -0.82
P20040 AC122408.1-201ENSMUST00000218949 218 ntBASIC9.94□□□□□ -0.82
P20040 CT009713.8-202ENSMUST00000224732 385 ntBASIC9.94□□□□□ -0.82
P20040 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.94□□□□□ -0.82
P20040 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.94□□□□□ -0.82
P20040 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
P20040 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
P20040 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
P20040 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
P20040 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
P20040 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
P20040 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
P20040 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
P20040 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.93□□□□□ -0.82
P20040 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
P20040 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.93□□□□□ -0.82
P20040 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
P20040 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.93□□□□□ -0.82
P20040 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
P20040 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
P20040 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.93□□□□□ -0.82
P20040 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
P20040 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.93□□□□□ -0.82
P20040 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
P20040 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC9.93□□□□□ -0.82
P20040 Gm22902-201ENSMUST00000158488 302 ntBASIC9.93□□□□□ -0.82
P20040 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
P20040 Gm6397-201ENSMUST00000161973 1069 ntBASIC9.93□□□□□ -0.82
P20040 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
P20040 Gm28937-201ENSMUST00000185413 695 ntBASIC9.93□□□□□ -0.82
P20040 Gm29400-201ENSMUST00000187208 695 ntBASIC9.93□□□□□ -0.82
P20040 Gm28662-201ENSMUST00000188446 695 ntBASIC9.93□□□□□ -0.82
P20040 Gm28251-201ENSMUST00000188835 695 ntBASIC9.93□□□□□ -0.82
P20040 Gm37318-201ENSMUST00000194325 695 ntBASIC9.93□□□□□ -0.82
P20040 Gm38017-201ENSMUST00000194768 695 ntBASIC9.93□□□□□ -0.82
P20040 Gm37287-201ENSMUST00000195449 695 ntBASIC9.93□□□□□ -0.82
P20040 Gm37793-201ENSMUST00000195548 695 ntBASIC9.93□□□□□ -0.82
P20040 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.93□□□□□ -0.82
P20040 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC9.93□□□□□ -0.82
P20040 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
P20040 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC9.93□□□□□ -0.82
P20040 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms