Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Hoxc9P09633 Gm9166-201ENSMUST00000120293 561 ntBASIC14.41□□□□□ -0.1
Hoxc9P09633 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC14.41□□□□□ -0.1
Hoxc9P09633 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Hoxc9P09633 Gm20493-201ENSMUST00000173706 213 ntBASIC14.41□□□□□ -0.1
Hoxc9P09633 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 Gm7627-201ENSMUST00000183205 999 ntBASIC14.41□□□□□ -0.1
Hoxc9P09633 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC14.41□□□□□ -0.1
Hoxc9P09633 Gm8162-201ENSMUST00000213951 665 ntBASIC14.41□□□□□ -0.1
Hoxc9P09633 Gm18042-201ENSMUST00000219887 790 ntBASIC14.41□□□□□ -0.1
Hoxc9P09633 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 Gm37160-201ENSMUST00000193081 1689 ntBASIC14.41□□□□□ -0.1
Hoxc9P09633 Gm5159-201ENSMUST00000212733 1652 ntBASIC14.41□□□□□ -0.1
Hoxc9P09633 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 Gm37058-201ENSMUST00000193393 1644 ntBASIC14.41□□□□□ -0.1
Hoxc9P09633 AC151836.1-201ENSMUST00000228730 1637 ntBASIC14.41□□□□□ -0.1
Hoxc9P09633 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hoxc9P09633 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc9P09633 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hoxc9P09633 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Hoxc9P09633 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc9P09633 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc9P09633 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc9P09633 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc9P09633 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc9P09633 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc9P09633 Gm23595-201ENSMUST00000104306 130 ntBASIC14.4□□□□□ -0.1
Hoxc9P09633 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC14.4□□□□□ -0.1
Hoxc9P09633 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc9P09633 Gm6441-201ENSMUST00000120983 696 ntBASIC14.4□□□□□ -0.1
Hoxc9P09633 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc9P09633 Mipep-ps-201ENSMUST00000177439 291 ntBASIC14.4□□□□□ -0.1
Hoxc9P09633 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc9P09633 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC14.4□□□□□ -0.1
Hoxc9P09633 Gm7445-201ENSMUST00000192115 340 ntBASIC14.4□□□□□ -0.1
Hoxc9P09633 Gm43097-201ENSMUST00000196867 151 ntBASIC14.4□□□□□ -0.1
Hoxc9P09633 CT025679.1-201ENSMUST00000227106 449 ntBASIC14.4□□□□□ -0.1
Hoxc9P09633 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc9P09633 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc9P09633 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hoxc9P09633 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Hoxc9P09633 Gm42432-201ENSMUST00000197902 1617 ntBASIC14.4□□□□□ -0.1
Hoxc9P09633 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc9P09633 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc9P09633 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc9P09633 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.4□□□□□ -0.1
Hoxc9P09633 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc9P09633 Gm37931-201ENSMUST00000194686 2866 ntBASIC14.4□□□□□ -0.1
Hoxc9P09633 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Hoxc9P09633 AC153524.2-202ENSMUST00000220401 1794 ntBASIC14.39□□□□□ -0.11
Hoxc9P09633 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hoxc9P09633 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Hoxc9P09633 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc9P09633 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hoxc9P09633 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hoxc9P09633 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.39□□□□□ -0.11
Hoxc9P09633 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC14.39□□□□□ -0.11
Hoxc9P09633 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Hoxc9P09633 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc9P09633 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC14.39□□□□□ -0.11
Hoxc9P09633 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC14.39□□□□□ -0.11
Hoxc9P09633 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC14.39□□□□□ -0.11
Hoxc9P09633 Gm6612-201ENSMUST00000170777 395 ntBASIC14.39□□□□□ -0.11
Hoxc9P09633 Gm9574-201ENSMUST00000173127 845 ntBASIC14.39□□□□□ -0.11
Hoxc9P09633 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc9P09633 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc9P09633 Gm28032-201ENSMUST00000184104 96 ntBASIC14.39□□□□□ -0.11
Hoxc9P09633 Gm27316-201ENSMUST00000184884 277 ntBASIC14.39□□□□□ -0.11
Hoxc9P09633 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC14.39□□□□□ -0.11
Hoxc9P09633 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC14.39□□□□□ -0.11
Hoxc9P09633 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc9P09633 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc9P09633 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC14.39□□□□□ -0.11
Hoxc9P09633 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc9P09633 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc9P09633 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc9P09633 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc9P09633 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hoxc9P09633 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc9P09633 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc9P09633 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc9P09633 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc9P09633 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc9P09633 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms