Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NpcdF8VQB8 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NpcdF8VQB8 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.53□□□□□ -0.24
NpcdF8VQB8 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.53□□□□□ -0.24
NpcdF8VQB8 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NpcdF8VQB8 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NpcdF8VQB8 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.53□□□□□ -0.24
NpcdF8VQB8 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NpcdF8VQB8 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NpcdF8VQB8 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NpcdF8VQB8 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NpcdF8VQB8 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NpcdF8VQB8 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NpcdF8VQB8 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NpcdF8VQB8 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NpcdF8VQB8 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
NpcdF8VQB8 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NpcdF8VQB8 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NpcdF8VQB8 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
NpcdF8VQB8 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.52□□□□□ -0.24
NpcdF8VQB8 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NpcdF8VQB8 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.52□□□□□ -0.24
NpcdF8VQB8 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.52□□□□□ -0.24
NpcdF8VQB8 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NpcdF8VQB8 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
NpcdF8VQB8 Gm8659-201ENSMUST00000120024 1084 ntBASIC13.52□□□□□ -0.25
NpcdF8VQB8 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Gm20495-201ENSMUST00000173902 235 ntBASIC13.52□□□□□ -0.25
NpcdF8VQB8 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Gm17944-201ENSMUST00000186351 643 ntBASIC13.52□□□□□ -0.25
NpcdF8VQB8 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC13.52□□□□□ -0.25
NpcdF8VQB8 AC117769.1-201ENSMUST00000224716 1120 ntBASIC13.52□□□□□ -0.25
NpcdF8VQB8 Nsmce2-203ENSMUST00000227173 1122 ntBASIC13.52□□□□□ -0.25
NpcdF8VQB8 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NpcdF8VQB8 n-R5s71-201ENSMUST00000093668 119 ntBASIC13.52□□□□□ -0.25
NpcdF8VQB8 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Gm10581-201ENSMUST00000097986 231 ntBASIC13.52□□□□□ -0.25
NpcdF8VQB8 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC13.52□□□□□ -0.25
NpcdF8VQB8 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NpcdF8VQB8 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NpcdF8VQB8 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.51□□□□□ -0.25
NpcdF8VQB8 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.51□□□□□ -0.25
NpcdF8VQB8 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Gm12028-201ENSMUST00000118065 436 ntBASIC13.51□□□□□ -0.25
NpcdF8VQB8 Gm12009-201ENSMUST00000121361 1100 ntBASIC13.51□□□□□ -0.25
NpcdF8VQB8 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC13.51□□□□□ -0.25
NpcdF8VQB8 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Gm5190-201ENSMUST00000192434 357 ntBASIC13.51□□□□□ -0.25
NpcdF8VQB8 Gm19918-201ENSMUST00000194858 400 ntBASIC13.51□□□□□ -0.25
NpcdF8VQB8 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC13.51□□□□□ -0.25
NpcdF8VQB8 AC241616.1-201ENSMUST00000213741 166 ntBASIC13.51□□□□□ -0.25
NpcdF8VQB8 AC158986.2-201ENSMUST00000227487 618 ntBASIC13.51□□□□□ -0.25
NpcdF8VQB8 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC13.51□□□□□ -0.25
NpcdF8VQB8 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NpcdF8VQB8 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NpcdF8VQB8 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms