Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.39□□□□□ -0.43
Brpf3B2KF05 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Gm43307-201ENSMUST00000199465 2371 ntBASIC12.38□□□□□ -0.43
Brpf3B2KF05 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.38□□□□□ -0.43
Brpf3B2KF05 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.38□□□□□ -0.43
Brpf3B2KF05 Gm26047-201ENSMUST00000157308 113 ntBASIC12.38□□□□□ -0.43
Brpf3B2KF05 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Gm25700-201ENSMUST00000177693 110 ntBASIC12.38□□□□□ -0.43
Brpf3B2KF05 Gm27572-201ENSMUST00000183702 255 ntBASIC12.38□□□□□ -0.43
Brpf3B2KF05 Gm26047-202ENSMUST00000198840 115 ntBASIC12.38□□□□□ -0.43
Brpf3B2KF05 Gm21769-201ENSMUST00000211922 111 ntBASIC12.38□□□□□ -0.43
Brpf3B2KF05 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.38□□□□□ -0.43
Brpf3B2KF05 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.38□□□□□ -0.43
Brpf3B2KF05 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.38□□□□□ -0.43
Brpf3B2KF05 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brpf3B2KF05 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.37□□□□□ -0.43
Brpf3B2KF05 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Gm13296-201ENSMUST00000117854 997 ntBASIC12.37□□□□□ -0.43
Brpf3B2KF05 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.37□□□□□ -0.43
Brpf3B2KF05 Gm13366-201ENSMUST00000122198 970 ntBASIC12.37□□□□□ -0.43
Brpf3B2KF05 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Gm16107-201ENSMUST00000162523 862 ntBASIC12.37□□□□□ -0.43
Brpf3B2KF05 AA914427-201ENSMUST00000193194 1166 ntBASIC12.37□□□□□ -0.43
Brpf3B2KF05 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.37□□□□□ -0.43
Brpf3B2KF05 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.37□□□□□ -0.43
Brpf3B2KF05 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Gm26448-201ENSMUST00000082446 203 ntBASIC12.37□□□□□ -0.43
Brpf3B2KF05 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.37□□□□□ -0.43
Brpf3B2KF05 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.37□□□□□ -0.43
Brpf3B2KF05 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Gm21817-201ENSMUST00000178584 2583 ntBASIC12.37□□□□□ -0.43
Brpf3B2KF05 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brpf3B2KF05 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Brpf3B2KF05 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brpf3B2KF05 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Brpf3B2KF05 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brpf3B2KF05 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.36□□□□□ -0.43
Brpf3B2KF05 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brpf3B2KF05 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brpf3B2KF05 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC12.36□□□□□ -0.43
Brpf3B2KF05 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brpf3B2KF05 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brpf3B2KF05 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brpf3B2KF05 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Brpf3B2KF05 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brpf3B2KF05 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.36□□□□□ -0.43
Brpf3B2KF05 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brpf3B2KF05 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Brpf3B2KF05 Gm22846-201ENSMUST00000157706 270 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms