Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1cQ9ES64 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1cQ9ES64 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1cQ9ES64 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1cQ9ES64 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC12.8□□□□□ -0.36
Ush1cQ9ES64 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC12.8□□□□□ -0.36
Ush1cQ9ES64 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1cQ9ES64 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC12.8□□□□□ -0.36
Ush1cQ9ES64 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1cQ9ES64 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1cQ9ES64 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ush1cQ9ES64 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1cQ9ES64 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1cQ9ES64 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ush1cQ9ES64 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ush1cQ9ES64 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Mir1896-201ENSMUST00000122641 81 ntBASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.79□□□□□ -0.36
Ush1cQ9ES64 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Gm11298-201ENSMUST00000120503 1799 ntBASIC12.79□□□□□ -0.36
Ush1cQ9ES64 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Mir877-201ENSMUST00000104738 85 ntBASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Gm11531-201ENSMUST00000117614 555 ntBASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Gm25668-201ENSMUST00000157700 129 ntBASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Gm31256-201ENSMUST00000194705 506 ntBASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Gm5950-201ENSMUST00000213337 772 ntBASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Gm6082-201ENSMUST00000215204 454 ntBASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1cQ9ES64 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms