Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Snord17-201ENSMUST00000104526 238 ntBASIC10.55□□□□□ -0.72
Clrn1Q8K445 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Gm14716-201ENSMUST00000120138 718 ntBASIC10.55□□□□□ -0.72
Clrn1Q8K445 Gm14585-201ENSMUST00000120713 634 ntBASIC10.55□□□□□ -0.72
Clrn1Q8K445 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.55□□□□□ -0.72
Clrn1Q8K445 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.55□□□□□ -0.72
Clrn1Q8K445 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Gm8546-201ENSMUST00000178288 1264 ntBASIC10.55□□□□□ -0.72
Clrn1Q8K445 Gm36991-201ENSMUST00000191800 648 ntBASIC10.55□□□□□ -0.72
Clrn1Q8K445 Gm37826-201ENSMUST00000195329 322 ntBASIC10.55□□□□□ -0.72
Clrn1Q8K445 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Gm42997-202ENSMUST00000200321 985 ntBASIC10.55□□□□□ -0.72
Clrn1Q8K445 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Gm8959-201ENSMUST00000213150 571 ntBASIC10.55□□□□□ -0.72
Clrn1Q8K445 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.55□□□□□ -0.72
Clrn1Q8K445 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Gm9244-201ENSMUST00000056767 2129 ntBASIC10.55□□□□□ -0.72
Clrn1Q8K445 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.55□□□□□ -0.72
Clrn1Q8K445 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clrn1Q8K445 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.54□□□□□ -0.72
Clrn1Q8K445 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.54□□□□□ -0.72
Clrn1Q8K445 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.54□□□□□ -0.72
Clrn1Q8K445 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Gm12218-201ENSMUST00000117666 399 ntBASIC10.54□□□□□ -0.72
Clrn1Q8K445 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Gm24992-201ENSMUST00000157412 130 ntBASIC10.54□□□□□ -0.72
Clrn1Q8K445 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.54□□□□□ -0.72
Clrn1Q8K445 Gm29067-201ENSMUST00000190821 470 ntBASIC10.54□□□□□ -0.72
Clrn1Q8K445 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms