Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10□□□□□ -0.81
Lysmd4Q8CC84 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Lysmd4Q8CC84 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10□□□□□ -0.81
Lysmd4Q8CC84 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10□□□□□ -0.81
Lysmd4Q8CC84 H2-Q3-201ENSMUST00000172583 608 ntBASIC10□□□□□ -0.81
Lysmd4Q8CC84 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Gm27320-201ENSMUST00000184892 109 ntBASIC10□□□□□ -0.81
Lysmd4Q8CC84 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Gm37666-201ENSMUST00000194110 866 ntBASIC10□□□□□ -0.81
Lysmd4Q8CC84 Gm18038-201ENSMUST00000197900 485 ntBASIC10□□□□□ -0.81
Lysmd4Q8CC84 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10□□□□□ -0.81
Lysmd4Q8CC84 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10□□□□□ -0.81
Lysmd4Q8CC84 AC151275.1-201ENSMUST00000224870 585 ntBASIC10□□□□□ -0.81
Lysmd4Q8CC84 AC118639.2-201ENSMUST00000226289 223 ntBASIC10□□□□□ -0.81
Lysmd4Q8CC84 AC137950.2-201ENSMUST00000227127 1089 ntBASIC10□□□□□ -0.81
Lysmd4Q8CC84 AC154436.1-201ENSMUST00000227272 782 ntBASIC10□□□□□ -0.81
Lysmd4Q8CC84 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Lysmd4Q8CC84 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10□□□□□ -0.81
Lysmd4Q8CC84 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Gm5380-201ENSMUST00000119296 2136 ntBASIC10□□□□□ -0.81
Lysmd4Q8CC84 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10□□□□□ -0.81
Lysmd4Q8CC84 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm24255-201ENSMUST00000104481 128 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm14592-201ENSMUST00000117201 560 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm4760-201ENSMUST00000119663 1030 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm11941-201ENSMUST00000119904 610 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm26361-201ENSMUST00000158868 186 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Mir7677-201ENSMUST00000184226 67 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Mir8109-201ENSMUST00000184375 117 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm29615-201ENSMUST00000185371 697 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm28224-201ENSMUST00000186078 697 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm29001-201ENSMUST00000186177 697 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm28292-201ENSMUST00000186593 697 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm28101-201ENSMUST00000187608 697 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm29076-201ENSMUST00000187689 697 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm28302-201ENSMUST00000187931 697 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm28646-201ENSMUST00000188220 697 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm28205-201ENSMUST00000189177 697 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm29032-201ENSMUST00000189797 697 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm28695-201ENSMUST00000190300 697 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm37448-201ENSMUST00000192795 697 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gm5186-201ENSMUST00000218781 920 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 AC154528.2-201ENSMUST00000228432 3023 ntBASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
Lysmd4Q8CC84 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms