Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Gm4917-201ENSMUST00000121452 650 ntBASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Mt1-202ENSMUST00000211807 1085 ntBASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Gm9111-201ENSMUST00000219394 709 ntBASIC12.32□□□□□ -0.44
Trim9Q8C7M3 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Mir5132-201ENSMUST00000175166 71 ntBASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Gm8197-202ENSMUST00000193422 934 ntBASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Gm5599-201ENSMUST00000209602 788 ntBASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim9Q8C7M3 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Gm37031-201ENSMUST00000195487 2530 ntBASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Gm6485-201ENSMUST00000160676 439 ntBASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.3□□□□□ -0.44
Trim9Q8C7M3 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.3□□□□□ -0.44
Trim9Q8C7M3 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms