Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh8Q7TSK3 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Gm8302-201ENSMUST00000119217 852 ntBASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Gm25517-201ENSMUST00000083865 134 ntBASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh8Q7TSK3 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Gm18059-201ENSMUST00000208073 580 ntBASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms