Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm25053-201ENSMUST00000103982 133 ntBASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm25922-201ENSMUST00000104281 130 ntBASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm11560-201ENSMUST00000117567 948 ntBASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm24679-201ENSMUST00000158762 111 ntBASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm37641-201ENSMUST00000193837 239 ntBASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm25053-202ENSMUST00000199731 132 ntBASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm5298-201ENSMUST00000201122 892 ntBASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm43912-201ENSMUST00000204352 538 ntBASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rc3h1Q4VGL6 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Gm37365-201ENSMUST00000193109 409 ntBASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Gm29747-201ENSMUST00000194764 585 ntBASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Gm44387-201ENSMUST00000196298 145 ntBASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Gm10020-201ENSMUST00000081993 612 ntBASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rc3h1Q4VGL6 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms