Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC9.62□□□□□ -0.87
Znf48Q3US17 Trdv3-201ENSMUST00000198551 309 ntBASIC9.62□□□□□ -0.87
Znf48Q3US17 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Znf48Q3US17 Gm42710-201ENSMUST00000200608 985 ntBASIC9.62□□□□□ -0.87
Znf48Q3US17 Gm20274-201ENSMUST00000206967 584 ntBASIC9.62□□□□□ -0.87
Znf48Q3US17 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC9.62□□□□□ -0.87
Znf48Q3US17 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
Znf48Q3US17 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Znf48Q3US17 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Znf48Q3US17 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Znf48Q3US17 CT009713.8-202ENSMUST00000224732 385 ntBASIC9.62□□□□□ -0.87
Znf48Q3US17 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Znf48Q3US17 Gm21811-201ENSMUST00000096485 930 ntBASIC9.62□□□□□ -0.87
Znf48Q3US17 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Znf48Q3US17 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Znf48Q3US17 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Znf48Q3US17 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Znf48Q3US17 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Znf48Q3US17 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Znf48Q3US17 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Znf48Q3US17 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Znf48Q3US17 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Znf48Q3US17 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Znf48Q3US17 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Znf48Q3US17 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Znf48Q3US17 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Znf48Q3US17 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC9.62□□□□□ -0.87
Znf48Q3US17 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Znf48Q3US17 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Znf48Q3US17 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.62□□□□□ -0.87
Znf48Q3US17 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Znf48Q3US17 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Znf48Q3US17 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC9.61□□□□□ -0.87
Znf48Q3US17 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC9.61□□□□□ -0.87
Znf48Q3US17 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Znf48Q3US17 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Znf48Q3US17 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Znf48Q3US17 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Znf48Q3US17 Gm11941-201ENSMUST00000119904 610 ntBASIC9.61□□□□□ -0.87
Znf48Q3US17 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC9.61□□□□□ -0.87
Znf48Q3US17 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC9.61□□□□□ -0.87
Znf48Q3US17 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Gm15279-201ENSMUST00000155593 288 ntBASIC9.61□□□□□ -0.87
Znf48Q3US17 Gm16296-201ENSMUST00000159905 325 ntBASIC9.61□□□□□ -0.87
Znf48Q3US17 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC9.61□□□□□ -0.87
Znf48Q3US17 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC9.61□□□□□ -0.87
Znf48Q3US17 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC9.61□□□□□ -0.87
Znf48Q3US17 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC9.61□□□□□ -0.87
Znf48Q3US17 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC9.61□□□□□ -0.87
Znf48Q3US17 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Znf48Q3US17 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Znf48Q3US17 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Znf48Q3US17 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.61□□□□□ -0.87
Znf48Q3US17 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Znf48Q3US17 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC9.61□□□□□ -0.87
Znf48Q3US17 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC9.61□□□□□ -0.87
Znf48Q3US17 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Znf48Q3US17 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Znf48Q3US17 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Znf48Q3US17 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Znf48Q3US17 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Znf48Q3US17 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Znf48Q3US17 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.6□□□□□ -0.87
Znf48Q3US17 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Znf48Q3US17 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Znf48Q3US17 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Znf48Q3US17 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Znf48Q3US17 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Znf48Q3US17 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms