Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm44663-201ENSMUST00000206898 3150 ntBASIC9.15□□□□□ -0.94
Trim63Q38HM4 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Sall1-201ENSMUST00000034090 5265 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Gm12576-201ENSMUST00000135268 3036 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Gm15467-201ENSMUST00000120582 445 ntBASIC9.15□□□□□ -0.94
Trim63Q38HM4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Gm6548-201ENSMUST00000167498 1165 ntBASIC9.15□□□□□ -0.94
Trim63Q38HM4 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Gm18304-201ENSMUST00000189162 546 ntBASIC9.15□□□□□ -0.94
Trim63Q38HM4 Gm32390-201ENSMUST00000212713 1172 ntBASIC9.15□□□□□ -0.94
Trim63Q38HM4 AC117245.4-202ENSMUST00000214403 3816 ntTSL 5 BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Itm2b-204ENSMUST00000228637 783 ntBASIC9.15□□□□□ -0.94
Trim63Q38HM4 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
Trim63Q38HM4 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Rap1gds1-201ENSMUST00000029796 3383 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Olfr429-202ENSMUST00000216346 2510 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Mroh3-205ENSMUST00000212798 2933 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Trim63Q38HM4 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC9.15□□□□□ -0.94
Trim63Q38HM4 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trim63Q38HM4 Ubap2-201ENSMUST00000030143 4368 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trim63Q38HM4 Clip1-201ENSMUST00000031382 4387 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Trim63Q38HM4 Gm9866-205ENSMUST00000220998 1973 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trim63Q38HM4 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trim63Q38HM4 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trim63Q38HM4 Pzp-201ENSMUST00000112132 4681 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trim63Q38HM4 4930470B04Rik-201ENSMUST00000192005 1926 ntBASIC9.15□□□□□ -0.95
Trim63Q38HM4 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trim63Q38HM4 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
Trim63Q38HM4 Pds5a-201ENSMUST00000031104 4146 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Trim63Q38HM4 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trim63Q38HM4 Map4k4-217ENSMUST00000195636 4082 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Trim63Q38HM4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trim63Q38HM4 Gm42815-201ENSMUST00000198787 1470 ntBASIC9.15□□□□□ -0.95
Trim63Q38HM4 Bub1b-201ENSMUST00000038341 3668 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trim63Q38HM4 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trim63Q38HM4 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Xrcc2-201ENSMUST00000030773 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Olfr1214-202ENSMUST00000216026 2126 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 AC122367.1-201ENSMUST00000221978 1709 ntBASIC9.14□□□□□ -0.95
Trim63Q38HM4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Myo6-212ENSMUST00000184480 4139 ntTSL 5 BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Slc26a1-202ENSMUST00000119270 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Slc26a1-204ENSMUST00000163328 3015 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Syncrip-207ENSMUST00000174269 3286 ntTSL 5 BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Inpp4a-205ENSMUST00000132401 3234 ntTSL 5 BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Gm14494-201ENSMUST00000118786 435 ntBASIC9.14□□□□□ -0.95
Trim63Q38HM4 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC9.14□□□□□ -0.95
Trim63Q38HM4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Gm22121-201ENSMUST00000175148 54 ntBASIC9.14□□□□□ -0.95
Trim63Q38HM4 Gm10253-201ENSMUST00000194270 940 ntBASIC9.14□□□□□ -0.95
Trim63Q38HM4 Gm42752-201ENSMUST00000198394 1106 ntBASIC9.14□□□□□ -0.95
Trim63Q38HM4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Gm17931-201ENSMUST00000208132 634 ntBASIC9.14□□□□□ -0.95
Trim63Q38HM4 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC9.14□□□□□ -0.95
Trim63Q38HM4 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.14□□□□□ -0.95
Trim63Q38HM4 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Gm10175-201ENSMUST00000086013 645 ntBASIC9.14□□□□□ -0.95
Trim63Q38HM4 Slc2a5-201ENSMUST00000030826 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Helz2-201ENSMUST00000094203 9162 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Radil-202ENSMUST00000085758 3714 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
Trim63Q38HM4 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 AC123534.1-202ENSMUST00000224256 1837 ntBASIC9.14□□□□□ -0.95
Trim63Q38HM4 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Klhdc7a-201ENSMUST00000105031 7807 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Gm38199-201ENSMUST00000192013 3277 ntBASIC9.14□□□□□ -0.95
Trim63Q38HM4 Ascc2-201ENSMUST00000070257 2650 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim63Q38HM4 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms