Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.78□□□□□ -0.52
Cntn3Q07409 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.78□□□□□ -0.52
Cntn3Q07409 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.78□□□□□ -0.52
Cntn3Q07409 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.78□□□□□ -0.52
Cntn3Q07409 Gm29067-201ENSMUST00000190821 470 ntBASIC11.78□□□□□ -0.52
Cntn3Q07409 Gm8197-202ENSMUST00000193422 934 ntBASIC11.78□□□□□ -0.52
Cntn3Q07409 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.78□□□□□ -0.52
Cntn3Q07409 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.78□□□□□ -0.52
Cntn3Q07409 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.78□□□□□ -0.52
Cntn3Q07409 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.78□□□□□ -0.52
Cntn3Q07409 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn3Q07409 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cntn3Q07409 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.78□□□□□ -0.52
Cntn3Q07409 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cntn3Q07409 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn3Q07409 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn3Q07409 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn3Q07409 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn3Q07409 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn3Q07409 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn3Q07409 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.78□□□□□ -0.52
Cntn3Q07409 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn3Q07409 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn3Q07409 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn3Q07409 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn3Q07409 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn3Q07409 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn3Q07409 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn3Q07409 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cntn3Q07409 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn3Q07409 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn3Q07409 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn3Q07409 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cntn3Q07409 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.77□□□□□ -0.52
Cntn3Q07409 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cntn3Q07409 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cntn3Q07409 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.77□□□□□ -0.52
Cntn3Q07409 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cntn3Q07409 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Cntn3Q07409 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn3Q07409 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn3Q07409 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn3Q07409 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.77□□□□□ -0.53
Cntn3Q07409 Gm12274-201ENSMUST00000120062 385 ntBASIC11.77□□□□□ -0.53
Cntn3Q07409 Gm10169-201ENSMUST00000121822 348 ntBASIC11.77□□□□□ -0.53
Cntn3Q07409 Gm16397-201ENSMUST00000122201 494 ntBASIC11.77□□□□□ -0.53
Cntn3Q07409 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.77□□□□□ -0.53
Cntn3Q07409 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.77□□□□□ -0.53
Cntn3Q07409 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.77□□□□□ -0.53
Cntn3Q07409 Gm24992-201ENSMUST00000157412 130 ntBASIC11.77□□□□□ -0.53
Cntn3Q07409 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cntn3Q07409 Olfml3-204ENSMUST00000169286 874 ntBASIC11.77□□□□□ -0.53
Cntn3Q07409 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cntn3Q07409 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cntn3Q07409 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cntn3Q07409 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cntn3Q07409 Mir6958-201ENSMUST00000184207 73 ntBASIC11.77□□□□□ -0.53
Cntn3Q07409 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn3Q07409 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn3Q07409 Gm43380-201ENSMUST00000200421 220 ntBASIC11.77□□□□□ -0.53
Cntn3Q07409 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.77□□□□□ -0.53
Cntn3Q07409 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn3Q07409 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.77□□□□□ -0.53
Cntn3Q07409 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn3Q07409 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Cntn3Q07409 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn3Q07409 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn3Q07409 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn3Q07409 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.77□□□□□ -0.53
Cntn3Q07409 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn3Q07409 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn3Q07409 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.77□□□□□ -0.53
Cntn3Q07409 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn3Q07409 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.77□□□□□ -0.53
Cntn3Q07409 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.77□□□□□ -0.53
Cntn3Q07409 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cntn3Q07409 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cntn3Q07409 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn3Q07409 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn3Q07409 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn3Q07409 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn3Q07409 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn3Q07409 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn3Q07409 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cntn3Q07409 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn3Q07409 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn3Q07409 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.76□□□□□ -0.53
Cntn3Q07409 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.76□□□□□ -0.53
Cntn3Q07409 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn3Q07409 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn3Q07409 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cntn3Q07409 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn3Q07409 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn3Q07409 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cntn3Q07409 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn3Q07409 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cntn3Q07409 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn3Q07409 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn3Q07409 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn3Q07409 Gm12218-201ENSMUST00000117666 399 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms