Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.61□□□□□ -0.39
Rrp1P56183 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp1P56183 Gm38357-201ENSMUST00000195382 2464 ntBASIC12.61□□□□□ -0.39
Rrp1P56183 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp1P56183 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Rrp1P56183 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.6□□□□□ -0.39
Rrp1P56183 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Rrp1P56183 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rrp1P56183 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
Rrp1P56183 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Gm27441-201ENSMUST00000185000 105 ntBASIC12.6□□□□□ -0.39
Rrp1P56183 Gm29499-201ENSMUST00000189151 486 ntBASIC12.6□□□□□ -0.39
Rrp1P56183 Gm28329-201ENSMUST00000191208 689 ntBASIC12.6□□□□□ -0.39
Rrp1P56183 Gm29171-201ENSMUST00000191397 486 ntBASIC12.6□□□□□ -0.39
Rrp1P56183 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Gm32111-201ENSMUST00000207689 846 ntBASIC12.6□□□□□ -0.39
Rrp1P56183 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.6□□□□□ -0.39
Rrp1P56183 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.6□□□□□ -0.39
Rrp1P56183 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.6□□□□□ -0.39
Rrp1P56183 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.6□□□□□ -0.39
Rrp1P56183 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rrp1P56183 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rrp1P56183 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rrp1P56183 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 AA474408-201ENSMUST00000098110 3339 ntBASIC12.6□□□□□ -0.39
Rrp1P56183 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Rrp1P56183 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp1P56183 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC12.6□□□□□ -0.39
Rrp1P56183 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rrp1P56183 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rrp1P56183 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Rrp1P56183 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rrp1P56183 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rrp1P56183 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Rrp1P56183 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp1P56183 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp1P56183 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC12.59□□□□□ -0.39
Rrp1P56183 Gm12799-201ENSMUST00000118151 2560 ntBASIC12.59□□□□□ -0.39
Rrp1P56183 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp1P56183 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp1P56183 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp1P56183 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp1P56183 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rrp1P56183 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp1P56183 Gm4294-201ENSMUST00000105169 614 ntBASIC12.59□□□□□ -0.39
Rrp1P56183 Gm14028-201ENSMUST00000117434 479 ntBASIC12.59□□□□□ -0.39
Rrp1P56183 Gm14208-201ENSMUST00000119645 678 ntBASIC12.59□□□□□ -0.39
Rrp1P56183 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Rrp1P56183 Gm23085-201ENSMUST00000157849 293 ntBASIC12.59□□□□□ -0.39
Rrp1P56183 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
Rrp1P56183 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Rrp1P56183 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.59□□□□□ -0.39
Rrp1P56183 Gm12407-201ENSMUST00000180219 324 ntBASIC12.59□□□□□ -0.39
Rrp1P56183 Gm9540-201ENSMUST00000188230 478 ntBASIC12.59□□□□□ -0.39
Rrp1P56183 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.59□□□□□ -0.39
Rrp1P56183 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.59□□□□□ -0.39
Rrp1P56183 Gm19208-201ENSMUST00000213861 912 ntBASIC12.59□□□□□ -0.39
Rrp1P56183 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Rrp1P56183 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp1P56183 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
Rrp1P56183 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp1P56183 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rrp1P56183 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rrp1P56183 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp1P56183 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp1P56183 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp1P56183 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp1P56183 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rrp1P56183 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rrp1P56183 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rrp1P56183 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rrp1P56183 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rrp1P56183 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp1P56183 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rrp1P56183 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.58□□□□□ -0.4
Rrp1P56183 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.58□□□□□ -0.4
Rrp1P56183 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.58□□□□□ -0.4
Rrp1P56183 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp1P56183 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms