Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.18□□□□□ -0.62
Atxn1P54254 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Gm24078-201ENSMUST00000158184 103 ntBASIC11.18□□□□□ -0.62
Atxn1P54254 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.18□□□□□ -0.62
Atxn1P54254 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Atxn1P54254 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC11.18□□□□□ -0.62
Atxn1P54254 AC154759.1-201ENSMUST00000224137 1159 ntBASIC11.18□□□□□ -0.62
Atxn1P54254 Gm5468-202ENSMUST00000227851 682 ntBASIC11.18□□□□□ -0.62
Atxn1P54254 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Atxn1P54254 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Atxn1P54254 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.18□□□□□ -0.62
Atxn1P54254 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.17□□□□□ -0.62
Atxn1P54254 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Atxn1P54254 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.17□□□□□ -0.62
Atxn1P54254 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Atxn1P54254 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.17□□□□□ -0.62
Atxn1P54254 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.17□□□□□ -0.62
Atxn1P54254 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.17□□□□□ -0.62
Atxn1P54254 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Atxn1P54254 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.17□□□□□ -0.62
Atxn1P54254 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Atxn1P54254 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Atxn1P54254 Mir453-201ENSMUST00000104732 82 ntBASIC11.17□□□□□ -0.62
Atxn1P54254 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Gm5395-201ENSMUST00000121650 915 ntBASIC11.17□□□□□ -0.62
Atxn1P54254 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Atxn1P54254 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.17□□□□□ -0.62
Atxn1P54254 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.17□□□□□ -0.62
Atxn1P54254 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.17□□□□□ -0.62
Atxn1P54254 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.17□□□□□ -0.62
Atxn1P54254 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Atxn1P54254 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Atxn1P54254 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.17□□□□□ -0.62
Atxn1P54254 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Atxn1P54254 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Atxn1P54254 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Atxn1P54254 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Atxn1P54254 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.17□□□□□ -0.62
Atxn1P54254 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atxn1P54254 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Atxn1P54254 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.16□□□□□ -0.62
Atxn1P54254 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Atxn1P54254 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.16□□□□□ -0.62
Atxn1P54254 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.16□□□□□ -0.62
Atxn1P54254 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms