Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm15258-201ENSMUST00000153801 741 ntBASIC11.49□□□□□ -0.57
Sox1P53783 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC11.49□□□□□ -0.57
Sox1P53783 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC11.49□□□□□ -0.57
Sox1P53783 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Gm17799-201ENSMUST00000183270 667 ntBASIC11.49□□□□□ -0.57
Sox1P53783 Gm28671-201ENSMUST00000187036 692 ntBASIC11.49□□□□□ -0.57
Sox1P53783 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Gm38349-201ENSMUST00000195732 462 ntBASIC11.49□□□□□ -0.57
Sox1P53783 Gm44658-201ENSMUST00000207965 637 ntBASIC11.49□□□□□ -0.57
Sox1P53783 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Sox1P53783 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sox1P53783 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC11.49□□□□□ -0.57
Sox1P53783 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox1P53783 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.49□□□□□ -0.57
Sox1P53783 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC11.49□□□□□ -0.57
Sox1P53783 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox1P53783 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sox1P53783 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox1P53783 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sox1P53783 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sox1P53783 Gm43339-201ENSMUST00000200032 1606 ntBASIC11.49□□□□□ -0.57
Sox1P53783 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.49□□□□□ -0.57
Sox1P53783 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sox1P53783 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox1P53783 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox1P53783 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox1P53783 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox1P53783 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox1P53783 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox1P53783 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox1P53783 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox1P53783 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox1P53783 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox1P53783 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox1P53783 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox1P53783 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox1P53783 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sox1P53783 Gm12849-201ENSMUST00000120013 739 ntBASIC11.48□□□□□ -0.57
Sox1P53783 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox1P53783 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox1P53783 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.48□□□□□ -0.57
Sox1P53783 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC11.48□□□□□ -0.57
Sox1P53783 Gm15664-201ENSMUST00000160167 184 ntBASIC11.48□□□□□ -0.57
Sox1P53783 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox1P53783 Gm22662-201ENSMUST00000175290 256 ntBASIC11.48□□□□□ -0.57
Sox1P53783 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC11.48□□□□□ -0.57
Sox1P53783 Gm9409-201ENSMUST00000197017 316 ntBASIC11.48□□□□□ -0.57
Sox1P53783 Gm6352-201ENSMUST00000203583 1134 ntBASIC11.48□□□□□ -0.57
Sox1P53783 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
Sox1P53783 Gm35638-201ENSMUST00000220724 652 ntBASIC11.48□□□□□ -0.57
Sox1P53783 AC155266.1-201ENSMUST00000220762 904 ntBASIC11.48□□□□□ -0.57
Sox1P53783 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC11.48□□□□□ -0.57
Sox1P53783 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.48□□□□□ -0.57
Sox1P53783 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sox1P53783 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sox1P53783 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox1P53783 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox1P53783 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.48□□□□□ -0.57
Sox1P53783 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox1P53783 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox1P53783 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox1P53783 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox1P53783 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox1P53783 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sox1P53783 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Sox1P53783 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Cog3-203ENSMUST00000227473 4197 ntBASIC11.47□□□□□ -0.57
Sox1P53783 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sox1P53783 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
Sox1P53783 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sox1P53783 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.47□□□□□ -0.57
Sox1P53783 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.47□□□□□ -0.57
Sox1P53783 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms