Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Gm24791-201ENSMUST00000104284 131 ntBASIC10.62□□□□□ -0.71
Nkx2-6P43688 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Gm15197-201ENSMUST00000120526 478 ntBASIC10.62□□□□□ -0.71
Nkx2-6P43688 Gm13284-201ENSMUST00000121020 547 ntBASIC10.62□□□□□ -0.71
Nkx2-6P43688 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Gm16030-201ENSMUST00000159098 603 ntBASIC10.62□□□□□ -0.71
Nkx2-6P43688 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.62□□□□□ -0.71
Nkx2-6P43688 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.62□□□□□ -0.71
Nkx2-6P43688 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.62□□□□□ -0.71
Nkx2-6P43688 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Gm4604-201ENSMUST00000025040 390 ntBASIC10.62□□□□□ -0.71
Nkx2-6P43688 Gm8325-201ENSMUST00000099086 453 ntBASIC10.62□□□□□ -0.71
Nkx2-6P43688 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.62□□□□□ -0.71
Nkx2-6P43688 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.61□□□□□ -0.71
Nkx2-6P43688 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.61□□□□□ -0.71
Nkx2-6P43688 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Gm17214-201ENSMUST00000164501 541 ntBASIC10.61□□□□□ -0.71
Nkx2-6P43688 Olfml3-204ENSMUST00000169286 874 ntBASIC10.61□□□□□ -0.71
Nkx2-6P43688 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Gm17889-201ENSMUST00000198410 598 ntBASIC10.61□□□□□ -0.71
Nkx2-6P43688 Gm44323-201ENSMUST00000198689 129 ntBASIC10.61□□□□□ -0.71
Nkx2-6P43688 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Nkx2-6P43688 AC154176.1-201ENSMUST00000225897 220 ntBASIC10.61□□□□□ -0.71
Nkx2-6P43688 CT573086.4-201ENSMUST00000226729 342 ntBASIC10.61□□□□□ -0.71
Nkx2-6P43688 AC130477.1-201ENSMUST00000226982 420 ntBASIC10.61□□□□□ -0.71
Nkx2-6P43688 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.61□□□□□ -0.71
Nkx2-6P43688 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC10.61□□□□□ -0.71
Nkx2-6P43688 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-6P43688 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms