Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Upk2P38575 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Upk2P38575 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Upk2P38575 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Upk2P38575 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Upk2P38575 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.81□□□□□ -0.84
Upk2P38575 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Upk2P38575 Gm9387-201ENSMUST00000098624 1320 ntBASIC9.81□□□□□ -0.84
Upk2P38575 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Upk2P38575 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Upk2P38575 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Upk2P38575 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Upk2P38575 AC124732.3-201ENSMUST00000221835 1765 ntBASIC9.8□□□□□ -0.84
Upk2P38575 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Upk2P38575 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Gm14398-201ENSMUST00000117287 1073 ntBASIC9.8□□□□□ -0.84
Upk2P38575 Gm16166-201ENSMUST00000118291 787 ntBASIC9.8□□□□□ -0.84
Upk2P38575 Gm13422-201ENSMUST00000118834 504 ntBASIC9.8□□□□□ -0.84
Upk2P38575 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC9.8□□□□□ -0.84
Upk2P38575 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC9.8□□□□□ -0.84
Upk2P38575 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 CT485606.1-201ENSMUST00000213187 878 ntBASIC9.8□□□□□ -0.84
Upk2P38575 AC155637.1-201ENSMUST00000218560 636 ntBASIC9.8□□□□□ -0.84
Upk2P38575 Gm9111-201ENSMUST00000219394 709 ntBASIC9.8□□□□□ -0.84
Upk2P38575 Gm10020-201ENSMUST00000081993 612 ntBASIC9.8□□□□□ -0.84
Upk2P38575 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.8□□□□□ -0.84
Upk2P38575 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.8□□□□□ -0.84
Upk2P38575 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.8□□□□□ -0.84
Upk2P38575 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Upk2P38575 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.8□□□□□ -0.84
Upk2P38575 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Upk2P38575 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Upk2P38575 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.79□□□□□ -0.84
Upk2P38575 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Upk2P38575 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.79□□□□□ -0.84
Upk2P38575 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC9.79□□□□□ -0.84
Upk2P38575 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC9.79□□□□□ -0.84
Upk2P38575 Gm14592-201ENSMUST00000117201 560 ntBASIC9.79□□□□□ -0.84
Upk2P38575 Gm14942-201ENSMUST00000119642 336 ntBASIC9.79□□□□□ -0.84
Upk2P38575 Gm13408-201ENSMUST00000119822 798 ntBASIC9.79□□□□□ -0.84
Upk2P38575 Gm14585-201ENSMUST00000120713 634 ntBASIC9.79□□□□□ -0.84
Upk2P38575 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Gm4917-201ENSMUST00000121452 650 ntBASIC9.79□□□□□ -0.84
Upk2P38575 Gm13935-201ENSMUST00000121859 798 ntBASIC9.79□□□□□ -0.84
Upk2P38575 Gm16570-201ENSMUST00000161951 436 ntBASIC9.79□□□□□ -0.84
Upk2P38575 Mir7070-201ENSMUST00000183657 86 ntBASIC9.79□□□□□ -0.84
Upk2P38575 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC9.79□□□□□ -0.84
Upk2P38575 Gm3551-201ENSMUST00000190750 664 ntBASIC9.79□□□□□ -0.84
Upk2P38575 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC9.79□□□□□ -0.84
Upk2P38575 Gm37905-201ENSMUST00000195310 341 ntBASIC9.79□□□□□ -0.84
Upk2P38575 Gm37826-201ENSMUST00000195329 322 ntBASIC9.79□□□□□ -0.84
Upk2P38575 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC9.79□□□□□ -0.84
Upk2P38575 Gm43916-201ENSMUST00000205062 967 ntBASIC9.79□□□□□ -0.84
Upk2P38575 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC9.79□□□□□ -0.84
Upk2P38575 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC9.79□□□□□ -0.84
Upk2P38575 Gm4797-201ENSMUST00000219075 1283 ntBASIC9.79□□□□□ -0.84
Upk2P38575 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.79□□□□□ -0.84
Upk2P38575 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Upk2P38575 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Upk2P38575 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Upk2P38575 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms