Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
VimP20152 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
VimP20152 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
VimP20152 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
VimP20152 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Gm23061-201ENSMUST00000102348 116 ntBASIC11.28□□□□□ -0.6
VimP20152 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
VimP20152 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.28□□□□□ -0.6
VimP20152 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
VimP20152 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.28□□□□□ -0.6
VimP20152 Gm16379-201ENSMUST00000161469 348 ntBASIC11.28□□□□□ -0.6
VimP20152 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.28□□□□□ -0.6
VimP20152 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
VimP20152 Gm27839-201ENSMUST00000184242 106 ntBASIC11.28□□□□□ -0.6
VimP20152 Gm8762-201ENSMUST00000193486 339 ntBASIC11.28□□□□□ -0.6
VimP20152 Gm8515-201ENSMUST00000194852 576 ntBASIC11.28□□□□□ -0.6
VimP20152 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
VimP20152 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
VimP20152 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
VimP20152 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
VimP20152 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.28□□□□□ -0.6
VimP20152 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.28□□□□□ -0.6
VimP20152 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
VimP20152 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
VimP20152 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.27□□□□□ -0.6
VimP20152 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
VimP20152 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
VimP20152 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
VimP20152 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
VimP20152 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
VimP20152 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
VimP20152 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.27□□□□□ -0.6
VimP20152 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
VimP20152 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC11.27□□□□□ -0.6
VimP20152 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
VimP20152 Gm44445-201ENSMUST00000204075 2683 ntBASIC11.27□□□□□ -0.6
VimP20152 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
VimP20152 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
VimP20152 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.27□□□□□ -0.6
VimP20152 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VimP20152 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC11.27□□□□□ -0.61
VimP20152 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VimP20152 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
VimP20152 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VimP20152 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
VimP20152 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
VimP20152 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.27□□□□□ -0.61
VimP20152 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
VimP20152 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VimP20152 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VimP20152 Gm11511-201ENSMUST00000118146 540 ntBASIC11.27□□□□□ -0.61
VimP20152 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VimP20152 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VimP20152 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
VimP20152 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.27□□□□□ -0.61
VimP20152 Gm25261-201ENSMUST00000157416 134 ntBASIC11.27□□□□□ -0.61
VimP20152 Gm25226-201ENSMUST00000158198 123 ntBASIC11.27□□□□□ -0.61
VimP20152 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.27□□□□□ -0.61
VimP20152 Gm6450-201ENSMUST00000200896 574 ntBASIC11.27□□□□□ -0.61
VimP20152 Gm2553-201ENSMUST00000215986 605 ntBASIC11.27□□□□□ -0.61
VimP20152 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.27□□□□□ -0.61
VimP20152 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VimP20152 Gm6180-201ENSMUST00000065243 498 ntBASIC11.27□□□□□ -0.61
VimP20152 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
VimP20152 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VimP20152 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC11.27□□□□□ -0.61
VimP20152 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VimP20152 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VimP20152 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
VimP20152 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
VimP20152 Gm43112-201ENSMUST00000196665 3122 ntBASIC11.27□□□□□ -0.61
VimP20152 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
VimP20152 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
VimP20152 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VimP20152 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.27□□□□□ -0.61
VimP20152 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
VimP20152 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VimP20152 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms