Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Fv4P11370 Gm7848-201ENSMUST00000210739 718 ntBASIC10.81□□□□□ -0.68
Fv4P11370 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.81□□□□□ -0.68
Fv4P11370 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.81□□□□□ -0.68
Fv4P11370 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.81□□□□□ -0.68
Fv4P11370 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.81□□□□□ -0.68
Fv4P11370 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.81□□□□□ -0.68
Fv4P11370 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Fv4P11370 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Fv4P11370 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.8□□□□□ -0.68
Fv4P11370 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.8□□□□□ -0.68
Fv4P11370 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Fv4P11370 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.8□□□□□ -0.68
Fv4P11370 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Fv4P11370 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Fv4P11370 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.8□□□□□ -0.68
Fv4P11370 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Fv4P11370 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.8□□□□□ -0.68
Fv4P11370 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.8□□□□□ -0.68
Fv4P11370 Gm16219-201ENSMUST00000120096 274 ntBASIC10.8□□□□□ -0.68
Fv4P11370 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.8□□□□□ -0.68
Fv4P11370 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.8□□□□□ -0.68
Fv4P11370 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.8□□□□□ -0.68
Fv4P11370 Gm37597-201ENSMUST00000191853 382 ntBASIC10.8□□□□□ -0.68
Fv4P11370 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.8□□□□□ -0.68
Fv4P11370 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.8□□□□□ -0.68
Fv4P11370 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.8□□□□□ -0.68
Fv4P11370 Gm1821-202ENSMUST00000227415 750 ntBASIC10.8□□□□□ -0.68
Fv4P11370 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Fv4P11370 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Fv4P11370 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.8□□□□□ -0.68
Fv4P11370 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.8□□□□□ -0.68
Fv4P11370 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Gm43152-201ENSMUST00000202495 1638 ntBASIC10.8□□□□□ -0.68
Fv4P11370 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.8□□□□□ -0.68
Fv4P11370 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.8□□□□□ -0.68
Fv4P11370 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Fv4P11370 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fv4P11370 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Fv4P11370 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Fv4P11370 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Fv4P11370 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Fv4P11370 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Fv4P11370 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Fv4P11370 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Fv4P11370 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Fv4P11370 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Fv4P11370 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Fv4P11370 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.79□□□□□ -0.68
Fv4P11370 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Fv4P11370 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Fv4P11370 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Fv4P11370 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Fv4P11370 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Fv4P11370 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.79□□□□□ -0.68
Fv4P11370 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Fv4P11370 Gm15528-201ENSMUST00000117821 864 ntBASIC10.79□□□□□ -0.68
Fv4P11370 Gm7857-201ENSMUST00000117957 358 ntBASIC10.79□□□□□ -0.68
Fv4P11370 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.79□□□□□ -0.68
Fv4P11370 Mir1896-201ENSMUST00000122641 81 ntBASIC10.79□□□□□ -0.68
Fv4P11370 Gm7666-201ENSMUST00000146631 819 ntBASIC10.79□□□□□ -0.68
Fv4P11370 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Fv4P11370 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.79□□□□□ -0.68
Fv4P11370 Gm25492-201ENSMUST00000157383 129 ntBASIC10.79□□□□□ -0.68
Fv4P11370 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms