Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Arhgap32-206ENSMUST00000182802 5621 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
P04224 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
P04224 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
P04224 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
P04224 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P04224 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
P04224 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P04224 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
P04224 Aff1-202ENSMUST00000054979 8323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
P04224 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.82□□□□□ -0.84
P04224 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC9.82□□□□□ -0.84
P04224 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC9.81□□□□□ -0.84
P04224 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC9.81□□□□□ -0.84
P04224 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.81□□□□□ -0.84
P04224 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
P04224 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC9.81□□□□□ -0.84
P04224 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
P04224 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
P04224 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC9.81□□□□□ -0.84
P04224 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC9.81□□□□□ -0.84
P04224 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC9.81□□□□□ -0.84
P04224 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
P04224 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC9.81□□□□□ -0.84
P04224 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC9.81□□□□□ -0.84
P04224 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC9.81□□□□□ -0.84
P04224 CT571245.2-201ENSMUST00000218421 305 ntBASIC9.81□□□□□ -0.84
P04224 Gm7046-201ENSMUST00000221351 977 ntBASIC9.81□□□□□ -0.84
P04224 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
P04224 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
P04224 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC9.81□□□□□ -0.84
P04224 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 Utp15-201ENSMUST00000040972 4120 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 Gm16486-201ENSMUST00000212436 4584 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
P04224 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
P04224 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.81□□□□□ -0.84
P04224 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
P04224 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P04224 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
P04224 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
P04224 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.8□□□□□ -0.84
P04224 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC9.8□□□□□ -0.84
P04224 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
P04224 Gm23931-201ENSMUST00000103842 109 ntBASIC9.8□□□□□ -0.84
P04224 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
P04224 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Gm5187-201ENSMUST00000117317 991 ntBASIC9.8□□□□□ -0.84
P04224 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC9.8□□□□□ -0.84
P04224 Gm11793-201ENSMUST00000120433 981 ntBASIC9.8□□□□□ -0.84
P04224 Gm19287-201ENSMUST00000203190 358 ntBASIC9.8□□□□□ -0.84
P04224 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.8□□□□□ -0.84
P04224 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
P04224 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
P04224 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
P04224 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
P04224 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC9.8□□□□□ -0.84
P04224 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms