Protein–RNA interactions for Protein: P01575

Ifnb1, Interferon beta, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifnb1P01575 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.79□□□□□ -0.52
Ifnb1P01575 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.79□□□□□ -0.52
Ifnb1P01575 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.79□□□□□ -0.52
Ifnb1P01575 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ifnb1P01575 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.79□□□□□ -0.52
Ifnb1P01575 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ifnb1P01575 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Ifnb1P01575 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ifnb1P01575 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ifnb1P01575 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Gm16219-201ENSMUST00000120096 274 ntBASIC11.79□□□□□ -0.52
Ifnb1P01575 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.79□□□□□ -0.52
Ifnb1P01575 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.79□□□□□ -0.52
Ifnb1P01575 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.79□□□□□ -0.52
Ifnb1P01575 Spcs1-203ENSMUST00000226374 592 ntBASIC11.79□□□□□ -0.52
Ifnb1P01575 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ifnb1P01575 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Ifnb1P01575 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.79□□□□□ -0.52
Ifnb1P01575 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Ifnb1P01575 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ifnb1P01575 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifnb1P01575 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ifnb1P01575 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.78□□□□□ -0.52
Ifnb1P01575 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ifnb1P01575 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.78□□□□□ -0.52
Ifnb1P01575 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.78□□□□□ -0.52
Ifnb1P01575 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ifnb1P01575 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.78□□□□□ -0.52
Ifnb1P01575 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.78□□□□□ -0.52
Ifnb1P01575 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.78□□□□□ -0.52
Ifnb1P01575 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.78□□□□□ -0.52
Ifnb1P01575 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.78□□□□□ -0.52
Ifnb1P01575 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.78□□□□□ -0.52
Ifnb1P01575 Gm5302-201ENSMUST00000202130 796 ntBASIC11.78□□□□□ -0.52
Ifnb1P01575 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.78□□□□□ -0.52
Ifnb1P01575 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.78□□□□□ -0.52
Ifnb1P01575 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.78□□□□□ -0.52
Ifnb1P01575 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.78□□□□□ -0.52
Ifnb1P01575 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ifnb1P01575 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ifnb1P01575 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.78□□□□□ -0.52
Ifnb1P01575 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Ifnb1P01575 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms