Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Gm8661-201ENSMUST00000118688 992 ntBASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Gm5764-201ENSMUST00000118817 885 ntBASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Gm26021-201ENSMUST00000158664 131 ntBASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Gm5501-201ENSMUST00000165917 832 ntBASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Gm21963-201ENSMUST00000179519 330 ntBASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Ighv1-11-201ENSMUST00000191801 351 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Gm19058-201ENSMUST00000192135 598 ntBASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Gm7812-201ENSMUST00000203479 874 ntBASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Gm22751-201ENSMUST00000102077 109 ntBASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Mir692-3-201ENSMUST00000102079 109 ntBASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Mir692-2-201ENSMUST00000102081 109 ntBASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Gm34248-201ENSMUST00000200027 474 ntBASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Gm44008-201ENSMUST00000204345 412 ntBASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 CR974487.1-201ENSMUST00000220984 413 ntBASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Gm18065-201ENSMUST00000221395 526 ntBASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 AC123698.1-201ENSMUST00000227090 402 ntBASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Gm8174-201ENSMUST00000064353 1001 ntBASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Gm14538-201ENSMUST00000122019 1327 ntBASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc188F6WEU2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms