Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.41□□□□□ -0.42
Brpf3B2KF05 Gm6334-201ENSMUST00000207083 228 ntBASIC12.41□□□□□ -0.42
Brpf3B2KF05 Gm45856-201ENSMUST00000212752 416 ntBASIC12.41□□□□□ -0.42
Brpf3B2KF05 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.41□□□□□ -0.42
Brpf3B2KF05 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brpf3B2KF05 Gm17872-201ENSMUST00000222550 532 ntBASIC12.41□□□□□ -0.42
Brpf3B2KF05 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brpf3B2KF05 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brpf3B2KF05 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brpf3B2KF05 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Brpf3B2KF05 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brpf3B2KF05 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brpf3B2KF05 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brpf3B2KF05 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Brpf3B2KF05 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Brpf3B2KF05 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.41□□□□□ -0.42
Brpf3B2KF05 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brpf3B2KF05 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brpf3B2KF05 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC12.41□□□□□ -0.42
Brpf3B2KF05 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brpf3B2KF05 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Brpf3B2KF05 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.41□□□□□ -0.42
Brpf3B2KF05 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC12.41□□□□□ -0.42
Brpf3B2KF05 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Brpf3B2KF05 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brpf3B2KF05 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.4□□□□□ -0.42
Brpf3B2KF05 Gm37785-201ENSMUST00000195783 2408 ntBASIC12.4□□□□□ -0.42
Brpf3B2KF05 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.4□□□□□ -0.42
Brpf3B2KF05 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Gm14363-201ENSMUST00000122304 409 ntBASIC12.4□□□□□ -0.42
Brpf3B2KF05 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.4□□□□□ -0.42
Brpf3B2KF05 Gm5714-201ENSMUST00000197343 566 ntBASIC12.4□□□□□ -0.42
Brpf3B2KF05 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 AC129323.1-201ENSMUST00000216733 470 ntBASIC12.4□□□□□ -0.42
Brpf3B2KF05 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC12.4□□□□□ -0.42
Brpf3B2KF05 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.4□□□□□ -0.42
Brpf3B2KF05 AC125539.1-201ENSMUST00000227423 622 ntBASIC12.4□□□□□ -0.42
Brpf3B2KF05 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brpf3B2KF05 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Brpf3B2KF05 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Brpf3B2KF05 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Brpf3B2KF05 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Brpf3B2KF05 Gm27501-201ENSMUST00000183599 107 ntBASIC12.39□□□□□ -0.43
Brpf3B2KF05 Gm27441-201ENSMUST00000185000 105 ntBASIC12.39□□□□□ -0.43
Brpf3B2KF05 Gm28746-201ENSMUST00000187453 380 ntBASIC12.39□□□□□ -0.43
Brpf3B2KF05 Gm36982-201ENSMUST00000193796 1128 ntBASIC12.39□□□□□ -0.43
Brpf3B2KF05 Gm43184-201ENSMUST00000197247 542 ntBASIC12.39□□□□□ -0.43
Brpf3B2KF05 Gm42867-201ENSMUST00000202995 469 ntBASIC12.39□□□□□ -0.43
Brpf3B2KF05 Gm44651-201ENSMUST00000207343 372 ntBASIC12.39□□□□□ -0.43
Brpf3B2KF05 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms