Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Gm12887B1AVM1 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Gm12887B1AVM1 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Gm12887B1AVM1 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Gm12887B1AVM1 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Gm12887B1AVM1 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
Gm12887B1AVM1 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC9□□□□□ -0.97
Gm12887B1AVM1 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Gm12887B1AVM1 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Gm38321-201ENSMUST00000195053 235 ntBASIC9□□□□□ -0.97
Gm12887B1AVM1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC9□□□□□ -0.97
Gm12887B1AVM1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC9□□□□□ -0.97
Gm12887B1AVM1 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Gm12887B1AVM1 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC9□□□□□ -0.97
Gm12887B1AVM1 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Gm12887B1AVM1 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Gm12887B1AVM1 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm12887B1AVM1 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Gm43274-201ENSMUST00000202545 5000 ntBASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Gm3096-201ENSMUST00000185770 364 ntBASIC8.99□□□□□ -0.97
Gm12887B1AVM1 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Gm37301-201ENSMUST00000195412 568 ntBASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Gm42629-201ENSMUST00000199063 1102 ntBASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 AC140406.1-201ENSMUST00000226481 465 ntBASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Gm4978-201ENSMUST00000071565 801 ntBASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 AC122367.1-201ENSMUST00000221978 1709 ntBASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm12887B1AVM1 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Gm12887B1AVM1 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms