Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk1bQ9Z2C6 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk1bQ9Z2C6 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk1bQ9Z2C6 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk1bQ9Z2C6 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Upk1bQ9Z2C6 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Nln-205ENSMUST00000224945 2486 ntBASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Snord17-201ENSMUST00000104526 238 ntBASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Gm11424-201ENSMUST00000121929 829 ntBASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Gm25226-201ENSMUST00000158198 123 ntBASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Gm27441-201ENSMUST00000185000 105 ntBASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Gm45224-201ENSMUST00000208203 414 ntBASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk1bQ9Z2C6 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Gm11663-201ENSMUST00000117888 290 ntBASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Gm8459-201ENSMUST00000162504 760 ntBASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Gm8815-201ENSMUST00000173809 620 ntBASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Gm27627-201ENSMUST00000183644 150 ntBASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 AY036118-201ENSMUST00000200021 923 ntBASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk1bQ9Z2C6 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms