Protein–RNA interactions for Protein: Q9Z1L4

Rs1, Retinoschisin, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rs1Q9Z1L4 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Rs1Q9Z1L4 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rs1Q9Z1L4 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rs1Q9Z1L4 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rs1Q9Z1L4 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rs1Q9Z1L4 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rs1Q9Z1L4 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Rs1Q9Z1L4 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rs1Q9Z1L4 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rs1Q9Z1L4 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm37122-201ENSMUST00000195313 1567 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm38089-201ENSMUST00000193585 1514 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm23596-201ENSMUST00000104304 132 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm15236-201ENSMUST00000117309 379 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm14071-201ENSMUST00000117817 509 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm11663-201ENSMUST00000117888 290 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm12749-201ENSMUST00000122138 1159 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Cd63-ps-202ENSMUST00000154992 717 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm24749-201ENSMUST00000157838 343 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm3332-201ENSMUST00000189337 928 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm18056-201ENSMUST00000207670 568 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm18061-201ENSMUST00000208350 562 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm18063-201ENSMUST00000208529 568 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm18052-201ENSMUST00000208750 559 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm21027-201ENSMUST00000219300 1236 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 CT485787.1-201ENSMUST00000225617 968 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm43127-201ENSMUST00000195890 2789 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Gm10417-201ENSMUST00000194341 3522 ntBASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rs1Q9Z1L4 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rs1Q9Z1L4 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rs1Q9Z1L4 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rs1Q9Z1L4 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Rs1Q9Z1L4 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rs1Q9Z1L4 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rs1Q9Z1L4 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Rs1Q9Z1L4 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Rs1Q9Z1L4 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rs1Q9Z1L4 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC8.4□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms