Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cdc40Q9DC48 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Cdc40Q9DC48 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Gm26013-201ENSMUST00000104404 119 ntBASIC10.45□□□□□ -0.74
Cdc40Q9DC48 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Gm8492-201ENSMUST00000182375 987 ntBASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Gm44008-201ENSMUST00000204345 412 ntBASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Cdc40Q9DC48 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Gm8459-201ENSMUST00000162504 760 ntBASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Gm29155-201ENSMUST00000185910 269 ntBASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Gm44315-201ENSMUST00000203041 219 ntBASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Gm10752-201ENSMUST00000218348 729 ntBASIC10.44□□□□□ -0.74
Cdc40Q9DC48 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdc40Q9DC48 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms