Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trem2Q99NH8 Platr10-202ENSMUST00000191479 818 ntBASIC11.4□□□□□ -0.58
Trem2Q99NH8 Gm38321-201ENSMUST00000195053 235 ntBASIC11.4□□□□□ -0.58
Trem2Q99NH8 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Trem2Q99NH8 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.4□□□□□ -0.58
Trem2Q99NH8 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trem2Q99NH8 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trem2Q99NH8 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trem2Q99NH8 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trem2Q99NH8 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.4□□□□□ -0.58
Trem2Q99NH8 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trem2Q99NH8 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trem2Q99NH8 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trem2Q99NH8 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trem2Q99NH8 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.4□□□□□ -0.59
Trem2Q99NH8 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trem2Q99NH8 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trem2Q99NH8 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trem2Q99NH8 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Trem2Q99NH8 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Trem2Q99NH8 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.4□□□□□ -0.59
Trem2Q99NH8 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Trem2Q99NH8 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trem2Q99NH8 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.39□□□□□ -0.59
Trem2Q99NH8 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.39□□□□□ -0.59
Trem2Q99NH8 Gm14942-201ENSMUST00000119642 336 ntBASIC11.39□□□□□ -0.59
Trem2Q99NH8 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.39□□□□□ -0.59
Trem2Q99NH8 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.39□□□□□ -0.59
Trem2Q99NH8 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.39□□□□□ -0.59
Trem2Q99NH8 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.39□□□□□ -0.59
Trem2Q99NH8 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Gm10020-201ENSMUST00000081993 612 ntBASIC11.39□□□□□ -0.59
Trem2Q99NH8 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trem2Q99NH8 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trem2Q99NH8 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.38□□□□□ -0.59
Trem2Q99NH8 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Gm28746-201ENSMUST00000187453 380 ntBASIC11.38□□□□□ -0.59
Trem2Q99NH8 Gm37458-201ENSMUST00000194055 410 ntBASIC11.38□□□□□ -0.59
Trem2Q99NH8 Gm37905-201ENSMUST00000195310 341 ntBASIC11.38□□□□□ -0.59
Trem2Q99NH8 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.38□□□□□ -0.59
Trem2Q99NH8 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem2Q99NH8 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms