Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.23□□□□□ -0.29
Col20a1Q923P0 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col20a1Q923P0 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col20a1Q923P0 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col20a1Q923P0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Col20a1Q923P0 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.23□□□□□ -0.29
Col20a1Q923P0 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col20a1Q923P0 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col20a1Q923P0 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col20a1Q923P0 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col20a1Q923P0 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC13.23□□□□□ -0.29
Col20a1Q923P0 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Col20a1Q923P0 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col20a1Q923P0 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col20a1Q923P0 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col20a1Q923P0 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col20a1Q923P0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col20a1Q923P0 Smok4a-201ENSMUST00000074512 1455 ntBASIC13.23□□□□□ -0.29
Col20a1Q923P0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col20a1Q923P0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col20a1Q923P0 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.22□□□□□ -0.29
Col20a1Q923P0 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.22□□□□□ -0.29
Col20a1Q923P0 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Gm13549-201ENSMUST00000118339 796 ntBASIC13.22□□□□□ -0.29
Col20a1Q923P0 Gm14993-201ENSMUST00000121180 164 ntBASIC13.22□□□□□ -0.29
Col20a1Q923P0 Gm17221-201ENSMUST00000163909 481 ntBASIC13.22□□□□□ -0.29
Col20a1Q923P0 Gm17073-201ENSMUST00000168069 556 ntBASIC13.22□□□□□ -0.29
Col20a1Q923P0 Gm43667-201ENSMUST00000198616 1095 ntBASIC13.22□□□□□ -0.29
Col20a1Q923P0 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Col20a1Q923P0 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col20a1Q923P0 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.22□□□□□ -0.29
Col20a1Q923P0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col20a1Q923P0 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col20a1Q923P0 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col20a1Q923P0 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC13.21□□□□□ -0.29
Col20a1Q923P0 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Mir7035-201ENSMUST00000184713 82 ntBASIC13.21□□□□□ -0.29
Col20a1Q923P0 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col20a1Q923P0 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col20a1Q923P0 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Gm9487-201ENSMUST00000216600 472 ntBASIC13.21□□□□□ -0.29
Col20a1Q923P0 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC13.21□□□□□ -0.29
Col20a1Q923P0 AC102569.1-201ENSMUST00000221563 685 ntBASIC13.21□□□□□ -0.29
Col20a1Q923P0 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC13.21□□□□□ -0.29
Col20a1Q923P0 AC159196.1-201ENSMUST00000225524 377 ntBASIC13.21□□□□□ -0.29
Col20a1Q923P0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col20a1Q923P0 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC13.21□□□□□ -0.29
Col20a1Q923P0 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.21□□□□□ -0.29
Col20a1Q923P0 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col20a1Q923P0 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col20a1Q923P0 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col20a1Q923P0 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col20a1Q923P0 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col20a1Q923P0 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col20a1Q923P0 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.21□□□□□ -0.3
Col20a1Q923P0 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms