Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.58□□□□□ -0.72
Clrn1Q8K445 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Clrn1Q8K445 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Clrn1Q8K445 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Clrn1Q8K445 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Clrn1Q8K445 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Clrn1Q8K445 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Clrn1Q8K445 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.57□□□□□ -0.72
Clrn1Q8K445 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.57□□□□□ -0.72
Clrn1Q8K445 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.57□□□□□ -0.72
Clrn1Q8K445 Gm16166-201ENSMUST00000118291 787 ntBASIC10.57□□□□□ -0.72
Clrn1Q8K445 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.57□□□□□ -0.72
Clrn1Q8K445 Gm16219-201ENSMUST00000120096 274 ntBASIC10.57□□□□□ -0.72
Clrn1Q8K445 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Gm25492-201ENSMUST00000157383 129 ntBASIC10.57□□□□□ -0.72
Clrn1Q8K445 Gm6485-201ENSMUST00000160676 439 ntBASIC10.57□□□□□ -0.72
Clrn1Q8K445 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.57□□□□□ -0.72
Clrn1Q8K445 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Gm6439-201ENSMUST00000199849 862 ntBASIC10.57□□□□□ -0.72
Clrn1Q8K445 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Clrn1Q8K445 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.57□□□□□ -0.72
Clrn1Q8K445 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.57□□□□□ -0.72
Clrn1Q8K445 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clrn1Q8K445 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Gm25076-201ENSMUST00000104098 132 ntBASIC10.56□□□□□ -0.72
Clrn1Q8K445 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.56□□□□□ -0.72
Clrn1Q8K445 n-R5s14-201ENSMUST00000122688 107 ntBASIC10.56□□□□□ -0.72
Clrn1Q8K445 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Gm21778-201ENSMUST00000178779 471 ntBASIC10.56□□□□□ -0.72
Clrn1Q8K445 Gm18558-201ENSMUST00000186253 1214 ntBASIC10.56□□□□□ -0.72
Clrn1Q8K445 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Gm3551-201ENSMUST00000190750 664 ntBASIC10.56□□□□□ -0.72
Clrn1Q8K445 Gm9645-201ENSMUST00000197131 792 ntBASIC10.56□□□□□ -0.72
Clrn1Q8K445 Gm43058-201ENSMUST00000197645 625 ntBASIC10.56□□□□□ -0.72
Clrn1Q8K445 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.56□□□□□ -0.72
Clrn1Q8K445 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.56□□□□□ -0.72
Clrn1Q8K445 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clrn1Q8K445 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms