Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Gm13809-201ENSMUST00000117921 597 ntBASIC11.09□□□□□ -0.63
Vps50Q8CI71 Gm13045-201ENSMUST00000119019 712 ntBASIC11.09□□□□□ -0.63
Vps50Q8CI71 Gm15131-201ENSMUST00000119124 595 ntBASIC11.09□□□□□ -0.63
Vps50Q8CI71 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.09□□□□□ -0.63
Vps50Q8CI71 Gm14441-201ENSMUST00000121960 540 ntBASIC11.09□□□□□ -0.63
Vps50Q8CI71 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Mir1943-201ENSMUST00000158276 73 ntBASIC11.09□□□□□ -0.63
Vps50Q8CI71 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Gm10774-201ENSMUST00000188689 204 ntBASIC11.09□□□□□ -0.63
Vps50Q8CI71 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.09□□□□□ -0.63
Vps50Q8CI71 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.09□□□□□ -0.63
Vps50Q8CI71 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.09□□□□□ -0.63
Vps50Q8CI71 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vps50Q8CI71 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.09□□□□□ -0.63
Vps50Q8CI71 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.09□□□□□ -0.63
Vps50Q8CI71 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vps50Q8CI71 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.09□□□□□ -0.63
Vps50Q8CI71 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC11.09□□□□□ -0.63
Vps50Q8CI71 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Vps50Q8CI71 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Vps50Q8CI71 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Gm15207-201ENSMUST00000119259 442 ntBASIC11.08□□□□□ -0.64
Vps50Q8CI71 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.08□□□□□ -0.64
Vps50Q8CI71 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Gm19353-201ENSMUST00000184561 445 ntBASIC11.08□□□□□ -0.64
Vps50Q8CI71 Gm7467-201ENSMUST00000185173 652 ntBASIC11.08□□□□□ -0.64
Vps50Q8CI71 Gm29499-201ENSMUST00000189151 486 ntBASIC11.08□□□□□ -0.64
Vps50Q8CI71 Gm5733-201ENSMUST00000190232 939 ntBASIC11.08□□□□□ -0.64
Vps50Q8CI71 Gm28329-201ENSMUST00000191208 689 ntBASIC11.08□□□□□ -0.64
Vps50Q8CI71 Gm29171-201ENSMUST00000191397 486 ntBASIC11.08□□□□□ -0.64
Vps50Q8CI71 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Gm10254-201ENSMUST00000052888 867 ntBASIC11.08□□□□□ -0.64
Vps50Q8CI71 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.08□□□□□ -0.64
Vps50Q8CI71 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Gm11298-201ENSMUST00000120503 1799 ntBASIC11.08□□□□□ -0.64
Vps50Q8CI71 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Vps50Q8CI71 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vps50Q8CI71 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Vps50Q8CI71 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Vps50Q8CI71 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.07□□□□□ -0.64
Vps50Q8CI71 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vps50Q8CI71 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vps50Q8CI71 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms