Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Gm26047-201ENSMUST00000157308 113 ntBASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Gm26047-202ENSMUST00000198840 115 ntBASIC13.09□□□□□ -0.31
Vps53Q8CCB4 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps53Q8CCB4 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.08□□□□□ -0.31
Vps53Q8CCB4 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.08□□□□□ -0.31
Vps53Q8CCB4 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Gm14942-201ENSMUST00000119642 336 ntBASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Gm23218-201ENSMUST00000158124 276 ntBASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Gm24844-201ENSMUST00000158679 127 ntBASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Gm22877-201ENSMUST00000175451 105 ntBASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.08□□□□□ -0.32
Vps53Q8CCB4 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Vps53Q8CCB4 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Gm25076-201ENSMUST00000104098 132 ntBASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Gm45120-201ENSMUST00000208880 408 ntBASIC13.07□□□□□ -0.32
Vps53Q8CCB4 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms