Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Gm16071-201ENSMUST00000119589 793 ntBASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Gm26461-201ENSMUST00000175064 290 ntBASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Gm9211-201ENSMUST00000182882 975 ntBASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Gm17826-201ENSMUST00000189720 798 ntBASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Gm44980-201ENSMUST00000205826 314 ntBASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Gm9132-201ENSMUST00000210182 832 ntBASIC12.34□□□□□ -0.43
Trim9Q8C7M3 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim9Q8C7M3 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.33□□□□□ -0.43
Trim9Q8C7M3 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Gm9133-201ENSMUST00000118289 540 ntBASIC12.33□□□□□ -0.44
Trim9Q8C7M3 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Gm37299-201ENSMUST00000193951 826 ntBASIC12.33□□□□□ -0.44
Trim9Q8C7M3 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Gm9645-201ENSMUST00000197131 792 ntBASIC12.33□□□□□ -0.44
Trim9Q8C7M3 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.33□□□□□ -0.44
Trim9Q8C7M3 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim9Q8C7M3 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim9Q8C7M3 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms