Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gli3Q61602 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.75□□□□□ -0.05
Gli3Q61602 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gli3Q61602 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gli3Q61602 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gli3Q61602 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Gli3Q61602 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Gli3Q61602 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gli3Q61602 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gli3Q61602 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Gli3Q61602 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gli3Q61602 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gli3Q61602 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Gli3Q61602 Gm9516-201ENSMUST00000119684 424 ntBASIC14.74□□□□□ -0.05
Gli3Q61602 Glns-ps1-201ENSMUST00000120291 1118 ntBASIC14.74□□□□□ -0.05
Gli3Q61602 Gm11295-201ENSMUST00000121379 803 ntBASIC14.74□□□□□ -0.05
Gli3Q61602 4933406K04Rik-201ENSMUST00000124068 1136 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Gli3Q61602 Gm8817-201ENSMUST00000126769 693 ntTSL 2 BASIC14.74□□□□□ -0.05
Gli3Q61602 Gm5244-201ENSMUST00000164001 339 ntBASIC14.74□□□□□ -0.05
Gli3Q61602 Gm2981-201ENSMUST00000213947 694 ntBASIC14.74□□□□□ -0.05
Gli3Q61602 AC108416.3-201ENSMUST00000226148 557 ntBASIC14.74□□□□□ -0.05
Gli3Q61602 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Gli3Q61602 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gli3Q61602 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gli3Q61602 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gli3Q61602 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Gli3Q61602 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gli3Q61602 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Gli3Q61602 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gli3Q61602 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gli3Q61602 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Gli3Q61602 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Gli3Q61602 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Gli3Q61602 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
Gli3Q61602 Gm13169-201ENSMUST00000122090 1459 ntBASIC14.74□□□□□ -0.05
Gli3Q61602 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Gli3Q61602 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.74□□□□□ -0.05
Gli3Q61602 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gli3Q61602 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gli3Q61602 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Gli3Q61602 Tes-201ENSMUST00000076654 2685 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Gli3Q61602 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Gli3Q61602 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC14.73□□□□□ -0.05
Gli3Q61602 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Gm14111-201ENSMUST00000119851 999 ntBASIC14.73□□□□□ -0.05
Gli3Q61602 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Gm26208-201ENSMUST00000158677 124 ntBASIC14.73□□□□□ -0.05
Gli3Q61602 Rsl24d1-203ENSMUST00000165177 597 ntTSL 3 BASIC14.73□□□□□ -0.05
Gli3Q61602 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 AC155293.1-201ENSMUST00000219793 1026 ntBASIC14.73□□□□□ -0.05
Gli3Q61602 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC14.73□□□□□ -0.05
Gli3Q61602 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC14.73□□□□□ -0.05
Gli3Q61602 Arl15-202ENSMUST00000224068 1002 ntBASIC14.73□□□□□ -0.05
Gli3Q61602 AC140426.1-201ENSMUST00000227933 459 ntBASIC14.73□□□□□ -0.05
Gli3Q61602 AC161581.1-201ENSMUST00000228696 318 ntBASIC14.73□□□□□ -0.05
Gli3Q61602 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Gli3Q61602 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Gm8055-201ENSMUST00000099956 1008 ntBASIC14.73□□□□□ -0.05
Gli3Q61602 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Gli3Q61602 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Gm5910-201ENSMUST00000211819 1746 ntBASIC14.73□□□□□ -0.05
Gli3Q61602 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.73□□□□□ -0.05
Gli3Q61602 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.73□□□□□ -0.05
Gli3Q61602 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC14.73□□□□□ -0.05
Gli3Q61602 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Gli3Q61602 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Gli3Q61602 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Gli3Q61602 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.73□□□□□ -0.05
Gli3Q61602 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Ighv2-2-201ENSMUST00000103443 352 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Gli3Q61602 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC14.73□□□□□ -0.05
Gli3Q61602 Gm3687-201ENSMUST00000161710 460 ntBASIC14.73□□□□□ -0.05
Gli3Q61602 Gm6098-201ENSMUST00000180234 330 ntBASIC14.73□□□□□ -0.05
Gli3Q61602 Gm38313-201ENSMUST00000191953 1266 ntBASIC14.73□□□□□ -0.05
Gli3Q61602 Pttg1-201ENSMUST00000020685 634 ntTSL 2 BASIC14.73□□□□□ -0.05
Gli3Q61602 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC14.73□□□□□ -0.05
Gli3Q61602 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.73□□□□□ -0.05
Gli3Q61602 Olfr371-202ENSMUST00000218663 1162 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Gli3Q61602 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Gli3Q61602 Gm10015-201ENSMUST00000072570 465 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms