Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Gm15573-201ENSMUST00000119487 540 ntBASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Gm9089-201ENSMUST00000122027 526 ntBASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Gm23045-201ENSMUST00000175041 96 ntBASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Syne3Q4FZC9 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Gm11836-201ENSMUST00000121022 441 ntBASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Gm20495-201ENSMUST00000173902 235 ntBASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Gm4654-201ENSMUST00000183305 982 ntBASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Gm37986-201ENSMUST00000193285 383 ntBASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Gm8574-201ENSMUST00000203207 924 ntBASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Gm5996-201ENSMUST00000211110 718 ntBASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms