Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.42□□□□□ -0.58
Ebf1Q07802 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Gm6754-201ENSMUST00000117124 913 ntBASIC11.42□□□□□ -0.58
Ebf1Q07802 Gm15003-201ENSMUST00000118884 446 ntBASIC11.42□□□□□ -0.58
Ebf1Q07802 Gm13445-201ENSMUST00000121664 307 ntBASIC11.42□□□□□ -0.58
Ebf1Q07802 Gm11354-201ENSMUST00000121974 422 ntBASIC11.42□□□□□ -0.58
Ebf1Q07802 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.42□□□□□ -0.58
Ebf1Q07802 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Gm25492-201ENSMUST00000157383 129 ntBASIC11.42□□□□□ -0.58
Ebf1Q07802 Gm17192-201ENSMUST00000169031 511 ntBASIC11.42□□□□□ -0.58
Ebf1Q07802 Gm20495-201ENSMUST00000173902 235 ntBASIC11.42□□□□□ -0.58
Ebf1Q07802 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Gm9081-201ENSMUST00000182346 991 ntBASIC11.42□□□□□ -0.58
Ebf1Q07802 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Mt1-202ENSMUST00000211807 1085 ntBASIC11.42□□□□□ -0.58
Ebf1Q07802 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.42□□□□□ -0.58
Ebf1Q07802 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ebf1Q07802 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Ebf1Q07802 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.42□□□□□ -0.58
Ebf1Q07802 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ebf1Q07802 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.42□□□□□ -0.58
Ebf1Q07802 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Ebf1Q07802 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ebf1Q07802 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC11.41□□□□□ -0.58
Ebf1Q07802 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.41□□□□□ -0.58
Ebf1Q07802 Gm11960-201ENSMUST00000122068 925 ntBASIC11.41□□□□□ -0.58
Ebf1Q07802 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.41□□□□□ -0.58
Ebf1Q07802 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ebf1Q07802 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC11.41□□□□□ -0.58
Ebf1Q07802 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.41□□□□□ -0.58
Ebf1Q07802 AC153961.1-201ENSMUST00000217760 385 ntBASIC11.41□□□□□ -0.58
Ebf1Q07802 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ebf1Q07802 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ebf1Q07802 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.41□□□□□ -0.58
Ebf1Q07802 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.41□□□□□ -0.58
Ebf1Q07802 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Ebf1Q07802 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ebf1Q07802 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.41□□□□□ -0.58
Ebf1Q07802 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf1Q07802 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Ebf1Q07802 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ebf1Q07802 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf1Q07802 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf1Q07802 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.4□□□□□ -0.58
Ebf1Q07802 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ebf1Q07802 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf1Q07802 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC11.4□□□□□ -0.58
Ebf1Q07802 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf1Q07802 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf1Q07802 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.4□□□□□ -0.58
Ebf1Q07802 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf1Q07802 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ebf1Q07802 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ebf1Q07802 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf1Q07802 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.4□□□□□ -0.58
Ebf1Q07802 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf1Q07802 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.4□□□□□ -0.58
Ebf1Q07802 Gm12943-201ENSMUST00000119616 210 ntBASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms