Protein–RNA interactions for Protein: P61406

Smg6, Telomerase-binding protein EST1A, mousemouse

Known RBP Predictions only

Length 1,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg6P61406 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smg6P61406 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC15.41■□□□□ 0.06
Smg6P61406 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smg6P61406 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smg6P61406 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smg6P61406 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Smg6P61406 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Smg6P61406 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smg6P61406 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC15.41■□□□□ 0.06
Smg6P61406 Mup-ps29-201ENSMUST00000122281 202 ntBASIC15.41■□□□□ 0.06
Smg6P61406 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smg6P61406 Gm17709-201ENSMUST00000174536 1096 ntBASIC15.41■□□□□ 0.06
Smg6P61406 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smg6P61406 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC15.41■□□□□ 0.06
Smg6P61406 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC15.41■□□□□ 0.06
Smg6P61406 Gm10263-201ENSMUST00000085163 300 ntBASIC15.41■□□□□ 0.06
Smg6P61406 Gm10699-201ENSMUST00000098916 2130 ntBASIC15.41■□□□□ 0.06
Smg6P61406 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smg6P61406 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smg6P61406 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smg6P61406 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smg6P61406 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smg6P61406 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smg6P61406 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Smg6P61406 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Smg6P61406 Gm18798-201ENSMUST00000187264 1700 ntBASIC15.4■□□□□ 0.06
Smg6P61406 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC15.4■□□□□ 0.06
Smg6P61406 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC15.4■□□□□ 0.06
Smg6P61406 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Smg6P61406 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smg6P61406 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smg6P61406 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC15.4■□□□□ 0.06
Smg6P61406 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smg6P61406 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smg6P61406 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smg6P61406 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smg6P61406 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smg6P61406 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smg6P61406 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
Smg6P61406 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC15.4■□□□□ 0.06
Smg6P61406 Ighv2-1-201ENSMUST00000170946 353 ntBASIC15.4■□□□□ 0.06
Smg6P61406 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC15.4■□□□□ 0.06
Smg6P61406 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smg6P61406 Gm8531-201ENSMUST00000188319 893 ntBASIC15.4■□□□□ 0.06
Smg6P61406 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smg6P61406 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC15.4■□□□□ 0.06
Smg6P61406 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smg6P61406 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smg6P61406 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Smg6P61406 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Smg6P61406 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC15.39■□□□□ 0.05
Smg6P61406 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Smg6P61406 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Gm11980-201ENSMUST00000121445 986 ntBASIC15.39■□□□□ 0.05
Smg6P61406 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Gm15744-201ENSMUST00000161734 213 ntBASIC15.39■□□□□ 0.05
Smg6P61406 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC15.39■□□□□ 0.05
Smg6P61406 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 AC114645.1-201ENSMUST00000215831 187 ntBASIC15.39■□□□□ 0.05
Smg6P61406 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
Smg6P61406 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC15.39■□□□□ 0.05
Smg6P61406 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Smg6P61406 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Smg6P61406 Gm37859-201ENSMUST00000195529 2173 ntBASIC15.39■□□□□ 0.05
Smg6P61406 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Smg6P61406 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Smg6P61406 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Smg6P61406 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC15.39■□□□□ 0.05
Smg6P61406 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
Smg6P61406 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Smg6P61406 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg6P61406 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smg6P61406 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC15.38■□□□□ 0.05
Smg6P61406 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smg6P61406 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smg6P61406 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smg6P61406 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms