Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.2□□□□□ -0.62
Atxn1P54254 BC080696-201ENSMUST00000202858 1218 ntBASIC11.2□□□□□ -0.62
Atxn1P54254 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.2□□□□□ -0.62
Atxn1P54254 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.2□□□□□ -0.62
Atxn1P54254 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Atxn1P54254 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Atxn1P54254 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Atxn1P54254 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.2□□□□□ -0.62
Atxn1P54254 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Atxn1P54254 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.19□□□□□ -0.62
Atxn1P54254 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.19□□□□□ -0.62
Atxn1P54254 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Atxn1P54254 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.19□□□□□ -0.62
Atxn1P54254 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Atxn1P54254 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Atxn1P54254 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.19□□□□□ -0.62
Atxn1P54254 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Gm12461-201ENSMUST00000120231 1239 ntBASIC11.19□□□□□ -0.62
Atxn1P54254 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Atxn1P54254 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.19□□□□□ -0.62
Atxn1P54254 Gm24328-201ENSMUST00000175104 67 ntBASIC11.19□□□□□ -0.62
Atxn1P54254 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.19□□□□□ -0.62
Atxn1P54254 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.19□□□□□ -0.62
Atxn1P54254 Gm2345-201ENSMUST00000193451 589 ntBASIC11.19□□□□□ -0.62
Atxn1P54254 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.19□□□□□ -0.62
Atxn1P54254 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC11.19□□□□□ -0.62
Atxn1P54254 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.19□□□□□ -0.62
Atxn1P54254 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.19□□□□□ -0.62
Atxn1P54254 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.19□□□□□ -0.62
Atxn1P54254 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Atxn1P54254 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Atxn1P54254 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.19□□□□□ -0.62
Atxn1P54254 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atxn1P54254 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.18□□□□□ -0.62
Atxn1P54254 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.18□□□□□ -0.62
Atxn1P54254 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.18□□□□□ -0.62
Atxn1P54254 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.18□□□□□ -0.62
Atxn1P54254 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.18□□□□□ -0.62
Atxn1P54254 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Atxn1P54254 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.18□□□□□ -0.62
Atxn1P54254 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Atxn1P54254 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.18□□□□□ -0.62
Atxn1P54254 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Gm13094-201ENSMUST00000117930 409 ntBASIC11.18□□□□□ -0.62
Atxn1P54254 Gm14497-201ENSMUST00000119537 580 ntBASIC11.18□□□□□ -0.62
Atxn1P54254 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atxn1P54254 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms