Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC11.51□□□□□ -0.57
Sox1P53783 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC11.51□□□□□ -0.57
Sox1P53783 AC164978.2-201ENSMUST00000226645 857 ntBASIC11.51□□□□□ -0.57
Sox1P53783 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sox1P53783 Gm10238-201ENSMUST00000089689 408 ntBASIC11.51□□□□□ -0.57
Sox1P53783 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox1P53783 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox1P53783 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox1P53783 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox1P53783 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox1P53783 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Sox1P53783 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox1P53783 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox1P53783 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.51□□□□□ -0.57
Sox1P53783 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox1P53783 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox1P53783 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox1P53783 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.51□□□□□ -0.57
Sox1P53783 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Sox1P53783 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Sox1P53783 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox1P53783 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox1P53783 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sox1P53783 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox1P53783 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sox1P53783 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox1P53783 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox1P53783 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.51□□□□□ -0.57
Sox1P53783 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox1P53783 Gm29101-201ENSMUST00000188329 1471 ntBASIC11.51□□□□□ -0.57
Sox1P53783 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox1P53783 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.51□□□□□ -0.57
Sox1P53783 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sox1P53783 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Gm14021-201ENSMUST00000117683 961 ntBASIC11.5□□□□□ -0.57
Sox1P53783 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.5□□□□□ -0.57
Sox1P53783 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
Sox1P53783 Tspy-ps-203ENSMUST00000186546 989 ntBASIC11.5□□□□□ -0.57
Sox1P53783 Gm28180-201ENSMUST00000189608 722 ntBASIC11.5□□□□□ -0.57
Sox1P53783 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sox1P53783 AC161374.2-201ENSMUST00000223662 596 ntBASIC11.5□□□□□ -0.57
Sox1P53783 AC133496.1-201ENSMUST00000223891 743 ntBASIC11.5□□□□□ -0.57
Sox1P53783 AC101205.2-201ENSMUST00000226206 715 ntBASIC11.5□□□□□ -0.57
Sox1P53783 AC124408.1-201ENSMUST00000228938 707 ntBASIC11.5□□□□□ -0.57
Sox1P53783 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Gm7589-201ENSMUST00000085631 534 ntBASIC11.5□□□□□ -0.57
Sox1P53783 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sox1P53783 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Gm8725-201ENSMUST00000221829 1333 ntBASIC11.5□□□□□ -0.57
Sox1P53783 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox1P53783 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Gm7061-201ENSMUST00000118127 1416 ntBASIC11.5□□□□□ -0.57
Sox1P53783 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.5□□□□□ -0.57
Sox1P53783 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox1P53783 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.49□□□□□ -0.57
Sox1P53783 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sox1P53783 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox1P53783 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Sox1P53783 Map1b-203ENSMUST00000223725 2669 ntBASIC11.49□□□□□ -0.57
Sox1P53783 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sox1P53783 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sox1P53783 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox1P53783 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.49□□□□□ -0.57
Sox1P53783 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms