Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.55□□□□□ -0.72
Sox6P40645 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Sox6P40645 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.55□□□□□ -0.72
Sox6P40645 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Gm12217-201ENSMUST00000118858 696 ntBASIC10.55□□□□□ -0.72
Sox6P40645 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.55□□□□□ -0.72
Sox6P40645 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.55□□□□□ -0.72
Sox6P40645 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.55□□□□□ -0.72
Sox6P40645 Gm26047-201ENSMUST00000157308 113 ntBASIC10.55□□□□□ -0.72
Sox6P40645 Gm23085-201ENSMUST00000157849 293 ntBASIC10.55□□□□□ -0.72
Sox6P40645 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.55□□□□□ -0.72
Sox6P40645 Gm16505-201ENSMUST00000179981 232 ntBASIC10.55□□□□□ -0.72
Sox6P40645 Gm8100-201ENSMUST00000182906 988 ntBASIC10.55□□□□□ -0.72
Sox6P40645 Gm9192-201ENSMUST00000183221 985 ntBASIC10.55□□□□□ -0.72
Sox6P40645 Gm38117-201ENSMUST00000194653 939 ntBASIC10.55□□□□□ -0.72
Sox6P40645 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.55□□□□□ -0.72
Sox6P40645 Gm26047-202ENSMUST00000198840 115 ntBASIC10.55□□□□□ -0.72
Sox6P40645 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Gm10288-201ENSMUST00000084614 537 ntBASIC10.55□□□□□ -0.72
Sox6P40645 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.55□□□□□ -0.72
Sox6P40645 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC10.55□□□□□ -0.72
Sox6P40645 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox6P40645 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Sox6P40645 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sox6P40645 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sox6P40645 Gm24891-201ENSMUST00000104391 136 ntBASIC10.54□□□□□ -0.72
Sox6P40645 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.54□□□□□ -0.72
Sox6P40645 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Gm8566-201ENSMUST00000120174 465 ntBASIC10.54□□□□□ -0.72
Sox6P40645 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Sox6P40645 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.54□□□□□ -0.72
Sox6P40645 Gm27552-201ENSMUST00000183351 62 ntBASIC10.54□□□□□ -0.72
Sox6P40645 Gm27844-201ENSMUST00000183613 62 ntBASIC10.54□□□□□ -0.72
Sox6P40645 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.54□□□□□ -0.72
Sox6P40645 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.54□□□□□ -0.72
Sox6P40645 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Gm6450-201ENSMUST00000200896 574 ntBASIC10.54□□□□□ -0.72
Sox6P40645 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.54□□□□□ -0.72
Sox6P40645 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.54□□□□□ -0.72
Sox6P40645 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.54□□□□□ -0.72
Sox6P40645 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.54□□□□□ -0.72
Sox6P40645 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.54□□□□□ -0.72
Sox6P40645 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Sox6P40645 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.54□□□□□ -0.72
Sox6P40645 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sox6P40645 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Sox6P40645 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Sox6P40645 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox6P40645 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sox6P40645 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.53□□□□□ -0.72
Sox6P40645 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sox6P40645 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms