Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC9.21□□□□□ -0.94
VhlP40338 Gm6722-201ENSMUST00000221586 390 ntBASIC9.21□□□□□ -0.94
VhlP40338 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VhlP40338 AC123665.1-201ENSMUST00000228204 438 ntBASIC9.21□□□□□ -0.94
VhlP40338 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VhlP40338 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VhlP40338 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VhlP40338 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.21□□□□□ -0.94
VhlP40338 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.94
VhlP40338 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VhlP40338 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VhlP40338 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9.21□□□□□ -0.94
VhlP40338 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VhlP40338 AC155245.1-201ENSMUST00000222266 1804 ntBASIC9.21□□□□□ -0.94
VhlP40338 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VhlP40338 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
VhlP40338 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.21□□□□□ -0.94
VhlP40338 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VhlP40338 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VhlP40338 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VhlP40338 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.94
VhlP40338 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
VhlP40338 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.2□□□□□ -0.94
VhlP40338 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
VhlP40338 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
VhlP40338 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Gm11509-201ENSMUST00000117358 325 ntBASIC9.2□□□□□ -0.94
VhlP40338 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
VhlP40338 Olfml3-204ENSMUST00000169286 874 ntBASIC9.2□□□□□ -0.94
VhlP40338 Gm8815-201ENSMUST00000173809 620 ntBASIC9.2□□□□□ -0.94
VhlP40338 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC9.2□□□□□ -0.94
VhlP40338 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC9.2□□□□□ -0.94
VhlP40338 Gm38151-201ENSMUST00000195085 289 ntBASIC9.2□□□□□ -0.94
VhlP40338 Gm5714-201ENSMUST00000197343 566 ntBASIC9.2□□□□□ -0.94
VhlP40338 AY036118-201ENSMUST00000200021 923 ntBASIC9.2□□□□□ -0.94
VhlP40338 Gm43822-201ENSMUST00000200285 476 ntBASIC9.2□□□□□ -0.94
VhlP40338 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
VhlP40338 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
VhlP40338 Cts7-204ENSMUST00000225321 1257 ntBASIC9.2□□□□□ -0.94
VhlP40338 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
VhlP40338 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
VhlP40338 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
VhlP40338 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
VhlP40338 Gm26448-201ENSMUST00000082446 203 ntBASIC9.2□□□□□ -0.94
VhlP40338 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
VhlP40338 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.2□□□□□ -0.94
VhlP40338 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
VhlP40338 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
VhlP40338 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 AC174797.1-201ENSMUST00000224339 1649 ntBASIC9.2□□□□□ -0.94
VhlP40338 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.2□□□□□ -0.94
VhlP40338 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VhlP40338 Gm12799-201ENSMUST00000118151 2560 ntBASIC9.19□□□□□ -0.94
VhlP40338 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.94
VhlP40338 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VhlP40338 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
VhlP40338 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
VhlP40338 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VhlP40338 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VhlP40338 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VhlP40338 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VhlP40338 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VhlP40338 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VhlP40338 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms