Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Usp4P35123 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.78□□□□□ -0.52
Usp4P35123 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.78□□□□□ -0.52
Usp4P35123 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.78□□□□□ -0.52
Usp4P35123 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp4P35123 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp4P35123 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp4P35123 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.78□□□□□ -0.52
Usp4P35123 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Usp4P35123 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Usp4P35123 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.78□□□□□ -0.52
Usp4P35123 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.77□□□□□ -0.52
Usp4P35123 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Usp4P35123 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Usp4P35123 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Usp4P35123 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Usp4P35123 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Usp4P35123 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Usp4P35123 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.52
Usp4P35123 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Usp4P35123 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.77□□□□□ -0.53
Usp4P35123 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.77□□□□□ -0.53
Usp4P35123 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Usp4P35123 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Usp4P35123 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Usp4P35123 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.77□□□□□ -0.53
Usp4P35123 Gm15131-201ENSMUST00000119124 595 ntBASIC11.77□□□□□ -0.53
Usp4P35123 Gm15432-201ENSMUST00000121106 195 ntBASIC11.77□□□□□ -0.53
Usp4P35123 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.77□□□□□ -0.53
Usp4P35123 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Gm4310-201ENSMUST00000177847 889 ntBASIC11.77□□□□□ -0.53
Usp4P35123 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.77□□□□□ -0.53
Usp4P35123 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.77□□□□□ -0.53
Usp4P35123 Gm43962-201ENSMUST00000203898 190 ntBASIC11.77□□□□□ -0.53
Usp4P35123 Gm17827-201ENSMUST00000211825 742 ntBASIC11.77□□□□□ -0.53
Usp4P35123 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.77□□□□□ -0.53
Usp4P35123 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Usp4P35123 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Usp4P35123 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Usp4P35123 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.77□□□□□ -0.53
Usp4P35123 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Usp4P35123 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.77□□□□□ -0.53
Usp4P35123 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp4P35123 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp4P35123 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Usp4P35123 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Usp4P35123 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Usp4P35123 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Usp4P35123 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp4P35123 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Usp4P35123 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp4P35123 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.76□□□□□ -0.53
Usp4P35123 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Usp4P35123 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.76□□□□□ -0.53
Usp4P35123 Gm14058-201ENSMUST00000116082 735 ntBASIC11.76□□□□□ -0.53
Usp4P35123 Gm12501-201ENSMUST00000119163 529 ntBASIC11.76□□□□□ -0.53
Usp4P35123 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.76□□□□□ -0.53
Usp4P35123 Mir1896-201ENSMUST00000122641 81 ntBASIC11.76□□□□□ -0.53
Usp4P35123 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.76□□□□□ -0.53
Usp4P35123 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Usp4P35123 Gm20495-201ENSMUST00000173902 235 ntBASIC11.76□□□□□ -0.53
Usp4P35123 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.76□□□□□ -0.53
Usp4P35123 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Usp4P35123 Gm7940-201ENSMUST00000218195 769 ntBASIC11.76□□□□□ -0.53
Usp4P35123 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Usp4P35123 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp4P35123 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp4P35123 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Usp4P35123 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp4P35123 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp4P35123 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp4P35123 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.76□□□□□ -0.53
Usp4P35123 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp4P35123 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp4P35123 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Usp4P35123 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Usp4P35123 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Usp4P35123 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms