Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.42□□□□□ -0.58
PdgfrbP05622 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.42□□□□□ -0.58
PdgfrbP05622 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
PdgfrbP05622 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
PdgfrbP05622 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Gm16166-201ENSMUST00000118291 787 ntBASIC11.42□□□□□ -0.58
PdgfrbP05622 Gm11331-201ENSMUST00000119764 288 ntBASIC11.42□□□□□ -0.58
PdgfrbP05622 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.42□□□□□ -0.58
PdgfrbP05622 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Mir8115-201ENSMUST00000184992 119 ntBASIC11.42□□□□□ -0.58
PdgfrbP05622 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.42□□□□□ -0.58
PdgfrbP05622 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
PdgfrbP05622 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
PdgfrbP05622 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.42□□□□□ -0.58
PdgfrbP05622 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.42□□□□□ -0.58
PdgfrbP05622 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC11.42□□□□□ -0.58
PdgfrbP05622 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
PdgfrbP05622 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
PdgfrbP05622 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
PdgfrbP05622 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.42□□□□□ -0.58
PdgfrbP05622 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
PdgfrbP05622 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.42□□□□□ -0.58
PdgfrbP05622 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.42□□□□□ -0.58
PdgfrbP05622 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PdgfrbP05622 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PdgfrbP05622 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PdgfrbP05622 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
PdgfrbP05622 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PdgfrbP05622 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PdgfrbP05622 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
PdgfrbP05622 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PdgfrbP05622 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
PdgfrbP05622 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PdgfrbP05622 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
PdgfrbP05622 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
PdgfrbP05622 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
PdgfrbP05622 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PdgfrbP05622 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
PdgfrbP05622 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.41□□□□□ -0.58
PdgfrbP05622 Gm4294-201ENSMUST00000105169 614 ntBASIC11.41□□□□□ -0.58
PdgfrbP05622 Gm13611-201ENSMUST00000118269 318 ntBASIC11.41□□□□□ -0.58
PdgfrbP05622 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.41□□□□□ -0.58
PdgfrbP05622 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.41□□□□□ -0.58
PdgfrbP05622 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.41□□□□□ -0.58
PdgfrbP05622 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.41□□□□□ -0.58
PdgfrbP05622 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.41□□□□□ -0.58
PdgfrbP05622 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PdgfrbP05622 Gm6439-201ENSMUST00000199849 862 ntBASIC11.41□□□□□ -0.58
PdgfrbP05622 Gm44607-201ENSMUST00000205611 1090 ntBASIC11.41□□□□□ -0.58
PdgfrbP05622 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
PdgfrbP05622 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.41□□□□□ -0.58
PdgfrbP05622 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.41□□□□□ -0.58
PdgfrbP05622 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.41□□□□□ -0.58
PdgfrbP05622 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.41□□□□□ -0.58
PdgfrbP05622 AC154838.2-201ENSMUST00000226602 747 ntBASIC11.41□□□□□ -0.58
PdgfrbP05622 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.41□□□□□ -0.58
PdgfrbP05622 AC140209.1-201ENSMUST00000227875 284 ntBASIC11.41□□□□□ -0.58
PdgfrbP05622 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PdgfrbP05622 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PdgfrbP05622 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
PdgfrbP05622 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
PdgfrbP05622 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
PdgfrbP05622 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PdgfrbP05622 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.41□□□□□ -0.58
PdgfrbP05622 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PdgfrbP05622 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.41□□□□□ -0.58
PdgfrbP05622 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
PdgfrbP05622 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
PdgfrbP05622 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
PdgfrbP05622 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.41□□□□□ -0.58
PdgfrbP05622 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms