Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 AC133517.1-201ENSMUST00000225825 594 ntBASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 AC174797.2-201ENSMUST00000225835 165 ntBASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Gm12028-201ENSMUST00000118065 436 ntBASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Gm7765-201ENSMUST00000182585 974 ntBASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Mir6953-201ENSMUST00000184745 68 ntBASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Gm38313-201ENSMUST00000191953 1266 ntBASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 AC159810.1-201ENSMUST00000214838 1480 ntBASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 AC166361.2-201ENSMUST00000219269 1415 ntBASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 CT010480.4-201ENSMUST00000224654 2283 ntBASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 AC117769.1-201ENSMUST00000224716 1120 ntBASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 AC101205.2-201ENSMUST00000226206 715 ntBASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Mbnl2-204ENSMUST00000227012 2390 ntBASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 AC122273.1-201ENSMUST00000213634 2327 ntBASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 Mir8111-201ENSMUST00000184463 137 ntBASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 AC154213.1-201ENSMUST00000228234 583 ntBASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc180J3QNE4 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Gm16518-201ENSMUST00000117960 508 ntBASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Gm4930-201ENSMUST00000219926 1087 ntBASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Gm8557-201ENSMUST00000220777 475 ntBASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Gm25514-201ENSMUST00000083860 135 ntBASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc180J3QNE4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Gm14006-201ENSMUST00000122132 981 ntBASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Gm18123-201ENSMUST00000210874 822 ntBASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc180J3QNE4 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms