Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usf3B2RUQ2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usf3B2RUQ2 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.41□□□□□ -0.9
Usf3B2RUQ2 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usf3B2RUQ2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usf3B2RUQ2 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Gm11949-201ENSMUST00000117640 372 ntBASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Gm8815-201ENSMUST00000173809 620 ntBASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Gm3551-201ENSMUST00000190750 664 ntBASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Ighv5-11-201ENSMUST00000193354 371 ntBASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Gm44158-201ENSMUST00000203881 505 ntBASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Gm18561-201ENSMUST00000206027 804 ntBASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Gm6108-201ENSMUST00000208365 367 ntBASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Gm18198-201ENSMUST00000204986 1551 ntBASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usf3B2RUQ2 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Gm44421-201ENSMUST00000205064 1221 ntBASIC9.4□□□□□ -0.91
Usf3B2RUQ2 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.91
Usf3B2RUQ2 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Gm26989-201ENSMUST00000182608 749 ntBASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Gm38151-201ENSMUST00000195085 289 ntBASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Gm45410-201ENSMUST00000211331 1093 ntBASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Gm17213-201ENSMUST00000165161 1360 ntBASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms