Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.93□□□□□ -0.66
Cdh17Q9R100 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh17Q9R100 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.92□□□□□ -0.66
Cdh17Q9R100 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Gm22920-201ENSMUST00000102175 109 ntBASIC10.92□□□□□ -0.66
Cdh17Q9R100 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Mir1896-201ENSMUST00000122641 81 ntBASIC10.92□□□□□ -0.66
Cdh17Q9R100 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Gm19246-201ENSMUST00000173599 255 ntBASIC10.92□□□□□ -0.66
Cdh17Q9R100 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Gm23694-201ENSMUST00000179335 110 ntBASIC10.92□□□□□ -0.66
Cdh17Q9R100 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Gm28450-201ENSMUST00000187349 638 ntBASIC10.92□□□□□ -0.66
Cdh17Q9R100 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Gm8574-201ENSMUST00000203207 924 ntBASIC10.92□□□□□ -0.66
Cdh17Q9R100 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.92□□□□□ -0.66
Cdh17Q9R100 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.92□□□□□ -0.66
Cdh17Q9R100 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Olfr584-201ENSMUST00000098210 964 ntBASIC10.92□□□□□ -0.66
Cdh17Q9R100 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.92□□□□□ -0.66
Cdh17Q9R100 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cdh17Q9R100 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.92□□□□□ -0.66
Cdh17Q9R100 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.91□□□□□ -0.66
Cdh17Q9R100 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdh17Q9R100 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.91□□□□□ -0.66
Cdh17Q9R100 Gm14592-201ENSMUST00000117201 560 ntBASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms